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Animal sample from Hemiscyllium ocellatum (epaulette shark) for VGP genome, sHemOce1

Identifiers
BioSample: SAMN22550098; Sample name: Animal sample from Hemiscyllium ocellatum (epaulette shark) for VGP genome, sHemOce1; SRA: SRS18706220
Organism
Hemiscyllium ocellatum (epaulette shark)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Chondrichthyes; Elasmobranchii; Selachii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium
Package
Model organism or animal; version 1.0
Attributes
isolatesHemOce1
age4 months
development stagejuvenile
sexmale
tissuespleen
biomaterial providerARMI Monash University
birth dateSeptember 2018
birth locationARMI Monash University
collected byFrank Tulenko
collection date2019-01-02
death date02-Jan-2019
geographic locationAustralia: Clayton, Melbourne, Victoria
latitude and longitude37.9105 S 145.1293 E
specimen voucherJuvenile #1654
storage conditions-80oC
treatmentflash frozen
Description

The epaulette shark (Hemiscyllium ocellatum) species of longtailed carpet shark, found in shallow, tropical waters off of Australia and New Guinea. The common name comes from the large, white-margined black spot behind each pectoral fin, reminiscent of military epaulettes. they are nocturnal and walk with their fins (from Wikipedia entries). This juvenile male is from trio of samples (parents) breed and collected to create a high-quality reference genome for both maternal and paternal haplotypes. The juvenile was bred in captivity. Breeding and sample collection was conducted by Frank Tulenko, in coordination with Gavin Naylor, Peter Currie, and Olivier Fedrigo. Spleen from the male was used to create high-quality reference genome assemblies of each haplotype. Genome sequencing and assembly was coordinated by Erich D. Jarvis, and Olivier Fedrigo at the Rockefeller University Vertebrate Genome Lab, and Shawn Burgess, Jim Mullikin, and Adam Phillippy at NIH, as part of the Vertebrate Genomes Project (VGP).

BioProjects
PRJNA1034606 Hemiscyllium ocellatum isolate:sHemOce1
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PRJNA1008657
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PRJNA774310 Hemiscyllium ocellatum isolate:sHemOce1
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PRJNA774309 Hemiscyllium ocellatum isolate:sHemOce1
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PRJNA516733 Various_Species
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Submission
G10K, Erich Jarvis; 2021-10-24
Accession:
SAMN22550098
ID:
22550098

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