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Golovinomyces cichoracearum UCSC1 (Arabidopsis powdery mildew)

Identifiers
BioSample: SAMN05414055; Sample name: GcC1; SRA: SRS1608513
Organism
Golovinomyces cichoracearum
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Leotiomycetes; Erysiphales; Erysiphaceae; Golovinomyces
Package
Pathogen: environmental/food/other; version 1.0
Attributes
isolateUCSC1
collected byShauna Somerville
collection date1996
geographic locationUSA: Santa Cruz, California
isolation sourcegreenhouse-grown Arabidopsis thaliana plants
latitude and longitude36.9741 N 122.0308 W
hostArabidopsis thaliana
Description

Powdery mildew (PM) is one of the most important and widespread plant diseases caused by obligate biotrophic Ascomycete fungi in the order of Erysiphales. Monocot PM fungi such as Blumeria graminis f.sp. hordei (Bgh) infectious on barley and B. graminis f.sp. tritici (Bgt) infectious on wheat exhibit high-level of host-specialization. By contrast, many dicot PM fungi display rather broad host ranges. To understand why different PM fungi adopt distinct modes of host-adaption, we sequenced the genomes of four dicot PM strains belonging to Golovinomyces cichoracearum (GcC1, GcM1, GcM3) or Oidium neolycopersici (OnM2) and conducted comparative sequence analyses. This bioproject included the sequencing and assembly information of Golovinomyces cichoracearum UCSC1 (GcC1) which is found on sow thistle plants grown on the Shady Grove campus of University of Maryland. The genome sequence was sequenced at 41X coverage using an Illumina shotgun sequncing approach. The estimated genome size is 174 Mb.

BioProject
PRJNA329523 Golovinomyces cichoracearum isolate:UCSC1
Retrieve all samples from this project

Submission
University of Maryland, Shunyuan Xiao; 2016-07-18
Accession:
SAMN05414055
ID:
5414055

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