MIGS Cultured Bacterial/Archaeal sample from Lacto... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00115043; Sample name: HMPREF9219; SRA: SRS116576

Organism: Lactobacillus iners LEAF 3008A-a
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus iners

Attributes

collection date	not determined
estimated size	1273000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Lactobacillus iners LEAF 3008A-a
geographic location	not determined
source material identifiers	BEI HM-708
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	LEAF 3008A-a
environmental package	missing
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft68.39x;25
project_type	Reference Genome
misc_param: HMP body site	Vaginal
nucleic acid extraction	not determined
assembly	Newbler v. 2.3
misc_param: HMP supersite	urogenital_tract
sequencing method	454-GS-FLX-Titanium
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf