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Items: 1 to 20 of 4756

1.

Genome-wide nucleosome and transcription factor responses to genetic perturbations reveal mechanisms of chromatin-mediated transcriptional regulation

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
Department of Pharmacology and Cancer Biology, Duke University
Accession:
PRJNA1096944
ID:
1096944

2.

Refined mechanism of promoter Nucleosome-Depleted Regions resetting after replication

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Other
Scope:
Multiisolate
Francoise Stutz, Department of Molecular and Cellular Biology, University of Geneva
Accession:
PRJNA1090510
ID:
1090510

3.

Sef1-dependent gene expression in Saccharomyces cerevisiae

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
N411 JYL lab, Institute of Molecular Biology, Academia Sinica
Accession:
PRJNA1090084
ID:
1090084

4.

Swd2/Cps35 determines H3K4 tri-methylation via interactions with Set1 and Rad6_H3K4me3 ChIPseq in WT and several strains

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
Kangwon National University
Accession:
PRJNA1085653
ID:
1085653

5.

An end-to-end workflow to study newly synthesized mRNA following rapid protein depletion in Saccharomyces cerevisiae

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Donczew lab, Cell Cycle and Cancer Biology Research Program, Oklahoma Medical Research Foundation
Accession:
PRJNA1085387
ID:
1085387

6.

RPA and Rad27 limit templated and inverted insertions at DNA breaks

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Other
Scope:
Multiisolate
Boston children's hospital
Accession:
PRJNA1083233
ID:
1083233

7.

Saccharomyces cerevisiae

Identification of genes involved in high-production of threonine in Saccharomyces cerevisiae

Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Genome sequencing
Scope:
Monoisolate
Laboratory of Fermentation Science, Institute for Research Initiatives
Accession:
PRJDB16732
ID:
1081194

8.

Saccharomyces cerevisiae strain:W303-1B

Saccharomyces cerevisiae strain:W303-1B Raw sequence reads

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Raw sequence reads
Scope:
Multiisolate
Yale University
Accession:
PRJNA1080618
ID:
1080618

9.

wt and sua7-1 nascent mRNA profiling in relation to termination of transcription

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Schrader Lab, Biological Sciences, Wayne State University
Accession:
PRJNA1080519
ID:
1080519

10.

The kinase Rio1 and a ribosome collision-dependent decay pathway survey the integrity of 18S rRNA cleavage

Taxonomy:
Saccharomyces cerevisiae BY4741
Project data type: Other
Scope:
Multiisolate
Katrin Karbstein, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation and Technology
Accession:
PRJNA1080508
ID:
1080508

11.

Saccharomyces cerevisiae strain:K1401

Transcriptome of sake yeast in coculture with the kuratsuki Kocuria

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multispecies
Department of Food and Life Sciences, Toyo University
Accession:
PRJDB17615
ID:
1079925

12.

Saccharomyces cerevisiae strain:K1401

Transcriptome of sake yeast in monoculture

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Department of Food and Life Sciences, Toyo University
Accession:
PRJDB17614
ID:
1079924

13.

Effects of formalin-fixation on FAIRE-Seq and MNase-Seq signatures in yeast (RNA-Seq)

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
National Research Collections Australia, CSIRO
Accession:
PRJNA1078351
ID:
1078351

14.

Effects of formalin-fixation on FAIRE-Seq and MNase-Seq signatures in yeast

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
National Research Collections Australia, CSIRO
Accession:
PRJNA1078344
ID:
1078344

15.

Saccharomyces cerevisiae strain:SPSC01

Saccharomyces cerevisiae SPSC01 Genome sequencing and assembly

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
Shanghai Jiao Tong University
Accession:
PRJNA1075684
ID:
1075684

16.

Auto-sumoylation of the Ubc9 E2 SUMO-conjugating Enzyme Extends Cellular Lifespan (RNA-Seq)

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Lab of Molecular Epigenetics, Biotechnology, Kyungpook National University
Accession:
PRJNA1072738
ID:
1072738

17.

Growth regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes [RNA-seq]

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
IceLab, Physics, Umea University
Accession:
PRJNA1071641
ID:
1071641

18.

Growth regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes [ChIP-seq]

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Epigenomics
Scope:
Multiisolate
IceLab, Physics, Umea University
Accession:
PRJNA1071639
ID:
1071639

19.

Identification of calcineurin-dependent, Crz1-independent gene expression changes in response to chronic KCl stress

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Molecular, Cell and Cancer Biology, University of Massachusetts Medical School
Accession:
PRJNA1071034
ID:
1071034

20.

Identification of calcineurin-dependent gene expression changes in response to chronic CaCl2 stress

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Molecular, Cell and Cancer Biology, University of Massachusetts Medical School
Accession:
PRJNA1071032
ID:
1071032

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