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Accession: PRJNA39577 ID: 39577

microbial mat metagenome

Metagenome isolated from subsurface mine microbial mat

Microbial mat flourished along with the hot water stream in the Japanase subsurface mine.
AccessionPRJNA39577
Data TypeMetagenome
ScopeEnvironment
Organismmicrobial mat metagenome[Taxonomy ID: 527640]
unclassified sequences; metagenomes; ecological metagenomes; microbial mat metagenome
Publications (total 3)
  • Takami H et al., "A deeply branching thermophilic bacterium with an ancient acetyl-CoA pathway dominates a subsurface ecosystem.", PLoS One, 2012;7(1):e30559
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SubmissionRegistration date: 23-Jul-2009
Japan Agency for Marine-Earth Science & Technology
Locus Tag PrefixHGMM
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)6222
SRA Experiments2
Protein Sequences11216
Publications
PubMed3
PMC2
Other datasets
BioSample2
SRA Data Details
ParameterValue
Data volume, Mbases433
Data volume, Mbytes1069
Related Project Category: Same Sample
PRJDA49157 : Candidatus Caldiarchaeum subterraneum Metagenomic assembly

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