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Accession: PRJNA148183 ID: 148183

Genome-wide Transcriptional Responses of the Filamentous Fungus Aspergillus niger to Lignocellulose (Wheat straw) using RNA-sequencing

See Genome Information for Aspergillus niger
We have studied the physiological response of the fungus Aspergillus niger when exposed to wheat straw as a model lignocellulosic substrate. More...
AccessionPRJNA148183; GEO: GSE33852
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismAspergillus niger[Taxonomy ID: 5061]
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus niger
Publications
  • van Munster JM et al., "The role of carbon starvation in the induction of enzymes that degrade plant-derived carbohydrates in Aspergillus niger.", Fungal Genet Biol, 2014 Apr 29;72:34-47
  • Delmas S et al., "Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing.", PLoS Genet, 2012 Aug 9;8(8):e1002875
SubmissionRegistration date: 21-Nov-2011
Archer Lab, School of Biology, University of Nottingham
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed2
PMC2
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases14
Data volume, Mbytes13149

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