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Accession: PRJNA163891 ID: 163891

Saccharomyces cerevisiae (baker's yeast)

Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters

See Genome Information for Saccharomyces cerevisiae
Despite extensive research, our understanding of the rules according to which cis-regulatory sequences are converted into gene expression is limited We devised a method for obtaining parallel, highly accurate gene expression measurements from thousands of designed promoters and applied it to measure the effect of systematic changes in the location, number, orientation, affinity and organization of transcription-factor binding sites and nucleosome-disfavoring sequences. More...
AccessionPRJNA163891; GEO: GSE37851
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismSaccharomyces cerevisiae[Taxonomy ID: 4932]
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae
PublicationsSharon E et al., "Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.", Nat Biotechnol, 2012 May 20;30(6):521-30
SubmissionRegistration date: 20-May-2012
Eran Segal, Computer Science And Applied Mathematics, Weizmann Institute of Science
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases3
Data volume, Mbytes2842

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