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Accession: PRJNA115709 ID: 115709

Genome-wide analysis of gene expression perturbed by reptin shRNA in MCF7 subjected to normoxic and hypoxic conditions (human)

See Genome Information for Homo sapiens
In order to investigate the role of reptin methylation on the expression of hypoxia-responsive genes across the whole genome, we performed a microarray analysis from RNAs isolated from MCF7 cells expressing either control shRNA (shRNA) or reptin shRNA (shreptin) in normoxic and hypoxic conditions. More...
AccessionPRJNA115709; GEO: GSE15530
Data TypeTranscriptome or Gene expression
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsLee JS et al., "Negative regulation of hypoxic responses via induced Reptin methylation.", Mol Cell, 2010 Jul 9;39(1):71-85
SubmissionRegistration date: 2-Apr-2009
Systems Biology, School of interdisciplinary Bioscience and Bioengineering, Pohang Univ. of Science & Technology
Project Data:
Resource NameNumber
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Other datasets
GEO DataSets1
GEO Data Details
Data volume, Spots390424
Data volume, Processed Mbytes10
Data volume, Supplementary Mbytes3

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