The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA348349). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
| Accession | PRJNA433373 |
| Data Type | RefSeq Genome sequencing and assembly, RefSeq Transcriptome or Gene expression |
| Scope | Monoisolate |
| Organism | Salvelinus sp. IW2-2015[Taxonomy ID: 2691554] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus; Salvelinus sp. IW2-2015 |
| Publications (total 4) Less... | - Christensen KA et al., "The Arctic charr (Salvelinus alpinus) genome and transcriptome assembly.", PLoS One, 2018;13(9):e0204076
- Ahi EP et al., "Validation of reference genes for expression studies during craniofacial development in arctic charr.", PLoS One, 2013;8(6):e66389
- Sibthorpe D et al., "Characterisation and expression of the paired box protein 7 (Pax7) gene in polymorphic Arctic charr (Salvelinus alpinus).", Comp Biochem Physiol B Biochem Mol Biol, 2006 Nov-Dec;145(3-4):371-83
- Doiron S et al., "A comparative mitogenomic analysis of the potential adaptive value of Arctic charr mtDNA introgression in brook charr populations (Salvelinus fontinalis Mitchill).", Mol Biol Evol, 2002 Nov;19(11):1902-9
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| Submission | Registration date: 30-Jan-2018
University of Victoria |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 89337 |
| Transcript | 72597 |
| Protein Sequences | 60577 |
| Publications |
| PubMed | 4 |
| PMC | 2 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related GenBank Project
PRJNA348349 : Salvelinus sp. IW2-2015 isolate:IW2-2015 Genome sequencing and assembly