Mycobacterium kansasii (ID 374853) - BioProject

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Accession: PRJNA374853 ID: 374853

Mycobacterium kansasii

Mycobacterium kansasii Genome sequencing and assembly

See Genome Information for Mycobacterium kansasii

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18 additional projects are related by organism.

Mycobacterium kansasii is one of the most significant non-tuberculous mycobacterial (NTM) pathogens isolated from clinical specimens and responsible for a large part of NTM infections in human population. More...

Accession	PRJNA374853
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Mycobacterium kansasii[Taxonomy ID: 1768] Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii
Publications	Jagielski T et al., "Genomic Insights Into the Mycobacterium kansasii Complex: An Update.", Front Microbiol, 2019;10:2918
Grants	""A new algorithm for identification of Mycobacterium kansasii infections"" (Grant ID LIDER/044/457/L-4/12/NCBR/2013, The National Centre for Research and Development)
Submission	Registration date: 11-Apr-2017 - University of Lodz - Department of Applied Microbiology, University of Warsaw, Poland - Biobank Lab, University of Lodz, Lodz, Poland - Institute of Public Health, Ostrava, Czech Republic - Department of Internal Medicine, Pulmonology and Allergology, Warsaw Medical University - Division of Pulmonary and Critical Care Medicine, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, South Korea - Clinical Microbiology and Infection Control, Basurto Hospital, Spain - Mycobacteriology Laboratory, Hospital of Infectious Diseases in Warsaw, Warsaw, Poland - Radboud University Medical Center, Nijmegen, The Nedherlands - Forschungszentrum Borstel, Germany
Related Resources	A new algorithm for identification of Mycobacterium kansasii infections.
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2336
WGS master	15
Genomic DNA	6
Protein Sequences	65821
Publications
PubMed	1
PMC	1
Other datasets
BioSample	21
Assembly	21

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Scaffold

Total

6
15
21

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_002705965.1	NKRC00000000		SAMN07197157	49_11	Mycobacterium kansasii
GCA_002705785.1	NKQW00000000		SAMN07193056	K4	Mycobacterium kansasii
GCA_002705935.1	NKRD00000000		SAMN07197158	174_15_11	Mycobacterium kansasii
GCA_002705885.1	NKRB00000000		SAMN07197156	14_15	Mycobacterium kansasii
GCA_002705865.1	NKQY00000000		SAMN07193077	K14	Mycobacterium kansasii
GCA_002705825.1	NKQX00000000		SAMN07193078	K19	Mycobacterium kansasii
GCA_002085835.1		1	SAMN06339047	9MK	Mycobacterium kansasii
GCA_002085815.1		1	SAMN06339049	11MK	Mycobacterium kansasii
GCA_002085795.1		1	SAMN06339048	10MK	Mycobacterium kansasii
GCA_002085775.1		1	SAMN06339044	6MK	Mycobacterium kansasii
GCA_002086895.1	MWKY00000000		SAMN06339043	5MK	Mycobacterium kansasii
GCA_002086865.1	MWKW00000000		SAMN06215600	NLA001001166	Mycobacterium kansasii
GCA_002085645.1		1	SAMN06339042	4MK	Mycobacterium kansasii
GCA_002085625.1		1	SAMN06339040	1MK	Mycobacterium kansasii
GCA_002705925.1	NKRE00000000		SAMN07196566	241/15	Mycobacterium ostraviense
GCA_002086855.1	MWKV00000000		SAMN06339046	8MK	Mycobacterium persicum
GCA_002086935.1	MWKZ00000000		SAMN06339045	7MK	Mycobacterium persicum
GCA_002086925.1	MWKX00000000		SAMN06339041	3MK	Mycobacterium persicum
GCA_002086915.1	MWQA00000000		SAMN06368474	12MK	Mycobacterium persicum
GCA_002705835.1	NKQZ00000000		SAMN07196563	H48	Mycobacterium persicum
GCA_002705895.1	NKRA00000000		SAMN07193079	H47	Mycobacterium persicum

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Mycobacterium kansasii

Mycobacterium kansasii Genome sequencing and assembly

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