Salmonella enterica (ID 308370) - BioProject

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Accession: PRJNA308370 ID: 308370

Salmonella enterica

Salmonella enterica Genome sequencing and assembly

See Genome Information for Salmonella enterica

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3867 additional projects are related by organism.

Illumina paired-end reads for Salmonella enterica isolates of either Typhimurium, Newport, or Dublin serotype, from either New York state or Washington state, and from either bovine or human sources.

Accession	PRJNA308370
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Submission	Registration date: 13-Jan-2017 Cornell University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	9136
WGS master	90
SRA Experiments	90
Protein Sequences	433153
Other datasets
BioSample	126
Assembly	90

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

1
89
90

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002091315.1	NAAJ00000000	SAMN04394854	R9_3278_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091285.1	NAAS00000000	SAMN04394784	R9_3269_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091275.1	NAAU00000000	SAMN04394830	R9_0042_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091255.1	NAAW00000000	SAMN04394842	R8_8081_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091235.1	NAAT00000000	SAMN04394834	R9_0437_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091215.1	NABA00000000	SAMN04394773	R8_0784_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091185.1	NAAK00000000	SAMN04394819	R9_3277_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091175.1	NABG00000000	SAMN04394886	R9_3265_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002091155.1	NABJ00000000	SAMN04394754	R9_3261_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002091125.1	NAAL00000000	SAMN04394774	R9_3276_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091115.1	NAAM00000000	SAMN04394917	R9_3275_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091095.1	NAAN00000000	SAMN04394777	R9_3274_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091075.1	NAAR00000000	SAMN04394898	R9_3270_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091045.1	NAAP00000000	SAMN04394870	R9_3272_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091025.1	NAAX00000000	SAMN04394822	R8_8073_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091015.1	NAAV00000000	SAMN04394787	R8_8132_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002090995.1	NAAY00000000	SAMN04394838	R8_6089_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002090955.1	NABB00000000	SAMN04394747	R8_0764_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002090945.1	NAAZ00000000	SAMN04394911	R8_5213_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002090935.1	NABC00000000	SAMN04394922	R8_0763_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002090915.1	NABD00000000	SAMN04394878	R9_3268_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090875.1	NABE00000000	SAMN04394775	R9_3267_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090865.1	NABH00000000	SAMN04394792	R9_3264_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090845.1	NABI00000000	SAMN04394810	R9_3263_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090835.1	NABF00000000	SAMN04394864	R9_3266_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090815.1	NABK00000000	SAMN04394906	R9_3254_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090775.1	NABX00000000	SAMN04394892	R9_3256_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090765.1	NABN00000000	SAMN04394756	R8_8684_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090755.1	NACF00000000	SAMN04394918	R8_1599_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090735.1	NABY00000000	SAMN04394921	R9_3255_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090705.1	NABL00000000	SAMN04394823	R9_3260_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090695.1	NABM00000000	SAMN04394828	R9_3259_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090665.1	NABO00000000	SAMN04394924	R8_4997_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090655.1	NABQ00000000	SAMN04394873	R8_4908_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090625.1	NABP00000000	SAMN04394905	R8_4995_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090615.1	NABR00000000	SAMN04394816	R8_2947_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090565.1	NABV00000000	SAMN04394887	R9_3258_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090555.1	NABS00000000	SAMN04394762	R8_2926_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090545.1	NABU00000000	SAMN04394888	R8_0802_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090535.1	NABT00000000	SAMN04394901	R8_1598_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_002090485.1	NABW00000000	SAMN04394871	R9_3257_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090475.1	NABZ00000000	SAMN04394835	R9_3253_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090465.1	NACB00000000	SAMN04394829	R8_5384_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090455.1	NACA00000000	SAMN04394825	R8_7956_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090395.1	NACD00000000	SAMN04394885	R8_3358_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090385.1	NACE00000000	SAMN04394868	R8_3349_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002090375.1	NACC00000000	SAMN04394895	R8_4810_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_002091335.1	NAAQ00000000	SAMN04394799	R9_3271_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002091345.1	NAAO00000000	SAMN04394891	R9_3273_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955475.1	MOCE00000000	SAMN04394781	R9_3252_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955465.1	MOCF00000000	SAMN04394776	R9_3251_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955455.1	MOCG00000000	SAMN04394914	R9_3249_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955415.1	MOCH00000000	SAMN04394801	R9_3248_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955395.1	MOCI00000000	SAMN04394850	R9_3247_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955385.1	MOCJ00000000	SAMN04394844	R9_3246_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955375.1	MOCL00000000	SAMN04394815	R9_3244_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955345.1	MOCM00000000	SAMN04394761	R9_3243_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955315.1	MOCN00000000	SAMN04394760	R8_9832_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955305.1	MOCO00000000	SAMN04394843	R8_9815_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955295.1	MOCP00000000	SAMN04394863	R8_9801_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955265.1	MOCQ00000000	SAMN04394768	R8_9118_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955235.1	MOCS00000000	SAMN04394916	R8_8274_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955225.1	MOCR00000000	SAMN04394881	R8_8387_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955215.1	MOCT00000000	SAMN04394827	R8_7307_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955195.1	MOCU00000000	SAMN04394826	R8_0865_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001955165.1	MOCV00000000	SAMN04394805	R9_3242_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001955145.1	MOCW00000000	SAMN04394900	R9_3241_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001955135.1	MOCY00000000	SAMN04394791	R8_8631_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001955105.1	MODA00000000	SAMN04394865	R8_5931_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001955075.1	MODD00000000	SAMN04394899	R8_4157_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001955065.1	MODC00000000	SAMN04394812	R8_4821_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001955055.1	MODE00000000	SAMN04394866	R8_4108_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001955035.1	MODI00000000	SAMN04394841	R8_0830_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001954995.1	MODJ00000000	SAMN04394765	R9_3236_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954985.1	MODK00000000	SAMN04394802	R9_3250_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954975.1	MODL00000000	SAMN04394920	R9_3235_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954935.1	MODO00000000	SAMN04394793	R9_3239_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954925.1	MODN00000000	SAMN04394902	R9_3233_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954905.1	MODM00000000	SAMN04394862	R9_3234_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954895.1	MOCK00000000	SAMN04394766	R9_3245_R1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_001954845.1	MOCX00000000	SAMN04394919	R9_3240_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001954835.1	MOCZ00000000	SAMN04394890	R8_8188_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001954825.1	MODB00000000	SAMN04394780	R8_5045_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001954815.1	MODF00000000	SAMN04394749	R8_4007_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001954765.1	MODG00000000	SAMN04394790	R8_2873_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001954755.1	MODH00000000	SAMN04394846	R8_2690_R1	Salmonella enterica subsp. enterica serovar Newport
GCA_001954745.1	MODQ00000000	SAMN04394889	R9_3231_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954735.1	MODP00000000	SAMN04394794	R9_3232_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001954705.1	MODR00000000	SAMN04394806	R8_7251_R1	Salmonella enterica subsp. enterica serovar Dublin
GCA_001952055.1	MOEM00000000	SAMN04394778	R8_3274_R1	Salmonella enterica subsp. enterica serovar Dublin

SRA Data Details

Parameter	Value
Data volume, Gbases	31
Data volume, Mbytes	12277

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Salmonella enterica Genome sequencing and assembly

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