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Accession: PRJNA28595 ID: 28595

Metagenomes from Porites compressa Following Stress

Viral and microbial metagenomes isolated from Porites compressa following various stress experiments

Viral and microbial metagenomes were isolated from Porites compressa during the following stressor experiments: temperature, dissolved organic carbon, reduced pH, and nutrients.
AccessionPRJNA28595
TypeUmbrella Metagenome project (Subtype:Metagenome)
Organismcoral metagenome[Taxonomy ID: 496922]
unclassified sequences; metagenomes; organismal metagenomes; coral metagenome
Publications
  • Dinsdale EA et al., "Functional metagenomic profiling of nine biomes.", Nature, 2008 Mar 12;452(7187):629-32
  • Wegley L et al., "Metagenomic analysis of the microbial community associated with the coral Porites astreoides.", Environ Microbiol, 2007 Nov;9(11):2707-19
SubmissionRegistration date: 28-Jan-2008
SDSU Center for Universial Microbial Sequencing
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)13
SRA Experiments13
Publications
PubMed4
PMC1
Other datasets
BioSample13
Assembly13
SRA Data Details
ParameterValue
Data volume, Mbases114
Data volume, Mbytes289
Metagenomes from Porites compressa Following Stress encompasses the following 13 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds or contigs
SRA or Trace
Total

12
1
13
BioProject
accession
Assembly
level
OrganismTitle
PRJNA28371 Scaffolds or contigscoral metagenomeMetagenome community from Porites astreoides (SDSU Center for Universal...)
PRJNA28415 SRA or Tracecoral metagenomeViral community from coral (SDSU Center for Universal...)
PRJNA28417 Scaffolds or contigscoral metagenomeViral community from coral (SDSU Center for Universal...)
PRJNA28419 Scaffolds or contigscoral metagenomeViral community from coral (SDSU Center for Universal...)
PRJNA28421 Scaffolds or contigscoral metagenomeViral community from coral (SDSU Center for Universal...)
List all 13 'Genome sequencing' projects...

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