Display Settings:

Format

Send to:

Choose Destination

Links from BioProject

Accession: PRJNA193500 ID: 193500

Studying UTI Defensins

See Genome Information for Escherichia coli
NIAID-funded study to compare E. coli strains known to cause urinary tract infection (UTI) with similar isolates from human subjects who have never experienced UTI. The aim is to identify UTI-specific genes and allelic variation that can contribute to UTI.
AccessionPRJNA193500
TypeUmbrella Comparative genomics project (Subtype:Comparative genomics)
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
SubmissionRegistration date: 20-Mar-2013
Broad Institute
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)17703
WGS master234
SRA Experiments434
Protein Sequences1116609
Other datasets
BioSample238
Assembly234
SRA Data Details
ParameterValue
Data volume, Gbases368
Data volume, Tbytes0.21
This project encompasses the following 237 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds
Contigs
SRA or Trace
Total

198
36
2
236
BioProject
accession
Assembly
level
OrganismTitle
PRJNA157563 ScaffoldsCitrobacter sp. KTE151Citrobacter sp. KTE151 Genome sequencing and assembly (Broad Institute)
PRJNA157557 ScaffoldsCitrobacter sp. KTE30Citrobacter sp. KTE30 Genome sequencing and assembly (Broad Institute)
PRJNA157619 ScaffoldsCitrobacter sp. KTE32Citrobacter sp. KTE32 Genome sequencing and assembly (Broad Institute)
PRJNA157549 ScaffoldsEscherichia coli KTE1Escherichia coli KTE1 Genome sequencing and assembly (Broad Institute)
PRJNA157579 ScaffoldsEscherichia coli KTE10Escherichia coli KTE10 Genome sequencing and assembly (Broad Institute)
List all 236 'Genome sequencing' projects...
Other1
BioProject
accession
NameTitle
PRJNA157073UTI DefensinsUTI Defensins (Broad Institute)

Supplemental Content

Related Resources

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center