Bees comprise over 4000 species in North America and 20,000 species globally and are vital pollinators of flowering plants in natural and agricultural landscapes. The Beenome100 project is a collaborative effort that aims to sequence 100+ reference quality genomes for bees, focusing on species that occur in the United States of America. Species have been selected based on taxonomic diversity, geographic area, conservation status, agricultural importance, biological diversity, and other factors. The data will be used to improve knowledge of U.S. bees at the genomic level and to facilitate research in bee management, health, and conservation. The project is being led by the University of Illinois Urbana-Champaign and the U.S. Department of Agriculture, Agricultural Research Service (USDA-ARS).
Accession | PRJNA923301 |
Type | Umbrella project |
Submission | Registration date: 12-Jan-2023
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Relevance | Agricultural |
Project Data:
Resource Name | Number of Links |
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Sequence data |
Nucleotide (total) | 27829 |
WGS master | 7 |
Transcript | 27544 |
SRA Experiments | 15 |
Protein Sequences | 23596 |
Other datasets |
BioSample | 11 |
Assembly | 7 |
This project encompasses the following 9 sub-projects:
Project Type | Number of Projects |
Genome sequencing | 6 1 1 1 9
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BioProject accession | Assembly level | Name | Title |
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PRJNA827177 | Chromosomes | Bombus affinis | Genome sequencing of Bombus affinis (rusty patched bumble bee) adult haploid male (United States Department...) | PRJNA1083964 | Chromosomes | Bombus fervidus | Genome sequencing of Bombus fervidus adult male (Beenome100) | PRJNA1185756 | Chromosomes | Bombus fervidus | Bombus fervidus RefSeq BioProject (NCBI) | PRJNA858880 | Chromosomes | Genome sequencing of Bombus huntii (Hunt bumble bee) adult haploid male | Genome sequencing of Bombus huntii (Hunt bumble bee) adult haploid male (USDA-ARS Ag100Pest) | PRJNA1143928 | SRA or Trace | Genome sequencing of Lasioglossum albipes adult male | Genome sequencing of Lasioglossum albipes adult male (Beenome100) | List all 9 'Genome sequencing' projects...BioProject accession | Assembly level | Name | Title |
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PRJNA827177 | Chromosomes | Bombus affinis | Genome sequencing of Bombus affinis (rusty patched bumble bee) adult haploid male (United States Department...) | PRJNA1083964 | Chromosomes | Bombus fervidus | Genome sequencing of Bombus fervidus adult male (Beenome100) | PRJNA1185756 | Chromosomes | Bombus fervidus | Bombus fervidus RefSeq BioProject (NCBI) | PRJNA858880 | Chromosomes | Genome sequencing of Bombus huntii (Hunt bumble bee) adult haploid male | Genome sequencing of Bombus huntii (Hunt bumble bee) adult haploid male (USDA-ARS Ag100Pest) | PRJNA1143928 | SRA or Trace | Genome sequencing of Lasioglossum albipes adult male | Genome sequencing of Lasioglossum albipes adult male (Beenome100) | PRJNA1072036 | Chromosomes | Genome sequencing of Protandrena (Anthemurgus) passiflorae adult male | Genome sequencing of Protandrena (Anthemurgus) passiflorae adult male (Beenome100) | PRJNA789933 | Scaffolds | Hylaeus anthracinus | 10x Chromium library linked read sequences of an adult male Hylaeus anthracinus bee (USDA-ARS) | PRJNA789929 | Chromosomes | Hylaeus volcanicus | 10x Chromium library linked read sequences of a adult male Hylaeus volcanicus bee (USDA-ARS) | PRJNA923015 | Contigs | Perdita meconis | Perdita meconis Genome sequencing and assembly (United States Department...) | Less... |