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Accession: PRJNA81095 ID: 81095

Escherichia coli O104:H4 str. 2011C-3493

Escherichia coli O104:H4 str. 2011C-3493 Genome sequencing

See Genome Information for Escherichia coli
Isolated from US citizen afflicted with HUS after travel to Germany during the 2011 E coli oubreak.
AccessionPRJNA81095
Data TypeGenome sequencing
ScopeMonoisolate
OrganismEscherichia coli O104:H4 str. 2011C-3493[Taxonomy ID: 1133852]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli O104:H4 str. 2011C-3493
PublicationsAhmed SA et al., "Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2.", PLoS One, 2012 Nov 1;7(11):e48228
SubmissionRegistration date: 27-Sep-2012
Los Alamos National Laboratory
RelevanceMedical
Locus Tag PrefixO3K
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)4
SRA Experiments3
Protein Sequences5150
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases12
Data volume, Mbytes9645
Related RefSeq Project
PRJNA176127 : Escherichia coli O104:H4 str. 2011C-3493 RefSeq Genome

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