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Accession: PRJNA556244 ID: 556244

Angiosperm wood formation

Evolutionary network genomics of wood formation in a phylogenetic survey of angiosperm forest trees

In this project, we modeled changes in gene co-expression relationships associated with the evolution of wood formation in a phylogenetic survey of 13 angiosperm tree species from the genera Liriodendron, Liquidambar, Eucalyptus, Populus and Salix.
AccessionPRJNA556244
Data TypeTranscriptome or Gene expression
ScopeMultispecies
Publications
  • Zinkgraf M et al., "Evolutionary network genomics of wood formation in a phylogenetic survey of angiosperm forest trees.", New Phytol, 2020 Dec;228(6):1811-1823
  • Published online: Zinkgraf M et al., "Evolutionary network genomics of wood formation in a phylogenetic survey of angiosperm forest trees", New Phytologist, 2020;
Grants
  • "Modeling And Manipulating The Regulation Of Tension Wood, An Economically Important Trait For Forest Products, Biofuels And Nanotechnology" (Grant ID 2015-67013-22891, United States Dept of Agriculture)
  • "Transcriptional Regulation and Gene Networks Underlying Vascular Cambium Development in Populus" (Grant ID IOS-1402064, National Science Foundation)
  • "Network Analysis of Wood Formation and Screening of Key Regulatory Genes" (Grant ID CAFYBB2012039, National Nonprofit Research Project of Chinese Academy of Forestry)
SubmissionRegistration date: 23-Jul-2019
Forest Service
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (TSA master)8
SRA Experiments159
Publications
PubMed1
Other datasets
BioSample159
SRA Data Details
ParameterValue
Data volume, Gbases1,062
Data volume, Tbytes0.41

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    Evolutionary network genomics of wood formation in a phylogenetic survey of angiosperm forest trees
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