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Accession: PRJNA547573 ID: 547573

Tissue-specific transcriptomes reveal gene expression trajectories in two maturing skin epithelial layers in zebrafish embryos (zebrafish)

See Genome Information for Danio rerio
We purified (FACS) and profiled (RNA-Seq) zebrafish embryo skin cells vs. nonskin cells at three early developmental stages. More...
AccessionPRJNA547573; GEO: GSE132304
Data TypeTranscriptome or Gene expression
OrganismDanio rerio[Taxonomy ID: 7955]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio; Danio rerio
PublicationsCokus SJ et al., "Tissue-Specific Transcriptomes Reveal Gene Expression Trajectories in Two Maturing Skin Epithelial Layers in Zebrafish Embryos.", G3 (Bethesda), 2019 Oct 7;9(10):3439-3452
  • "Cytoskeletal control of microridge morphogenesis on mucosal epithelial cells of the zebrafish skin" (Grant ID R01 GM122901, National Institute of General Medical Sciences)
  • "Peripheral Territory Establishment By Zebrafish Somatosensory Neurons" (Grant ID R01 AR064582, National Institute of Arthritis and Musculoskeletal and Skin Diseases)
  • "The morphogenesis of actin-based structures in mucosal epithelia" (Grant ID R21 EY024400, National Eye Institute)
SubmissionRegistration date: 6-Jun-2019
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments23
Other datasets
GEO DataSets1
GEO Data Details
Data volume, Supplementary Mbytes7351
SRA Data Details
Data volume, Gbases32
Data volume, Mbytes21536

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