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Accession: PRJNA547573 ID: 547573

Tissue-specific transcriptomes reveal gene expression trajectories in two maturing skin epithelial layers in zebrafish embryos (zebrafish)

See Genome Information for Danio rerio
We purified (FACS) and profiled (RNA-Seq) zebrafish embryo skin cells vs. nonskin cells at three early developmental stages. More...
AccessionPRJNA547573; GEO: GSE132304
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismDanio rerio[Taxonomy ID: 7955]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio; Danio rerio
PublicationsCokus SJ et al., "Tissue-Specific Transcriptomes Reveal Gene Expression Trajectories in Two Maturing Skin Epithelial Layers in Zebrafish Embryos.", G3 (Bethesda), 2019 Oct 7;9(10):3439-3452
Grants
  • "Cytoskeletal control of microridge morphogenesis on mucosal epithelial cells of the zebrafish skin" (Grant ID R01 GM122901, National Institute of General Medical Sciences)
  • "Peripheral Territory Establishment By Zebrafish Somatosensory Neurons" (Grant ID R01 AR064582, National Institute of Arthritis and Musculoskeletal and Skin Diseases)
  • "The morphogenesis of actin-based structures in mucosal epithelia" (Grant ID R21 EY024400, National Eye Institute)
SubmissionRegistration date: 6-Jun-2019
UCLA
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments23
Publications
PubMed1
PMC1
Other datasets
BioSample23
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes7351
SRA Data Details
ParameterValue
Data volume, Gbases32
Data volume, Mbytes21536

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