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Accession: PRJNA529679 ID: 529679

Highly-accurate long-read sequencing of HG002/NA24385

See Genome Information for Homo sapiens
PacBio Circular Consensus Sequencing (CCS) of the human male HG002/NA24385 to evaluate the ability of highly-accurate long-read sequencing to identify small and large variants, to phase variants into haplotypes, and to assemble a genome de novo.
AccessionPRJNA529679
TypeUmbrella project
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsWenger AM et al., "Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.", Nat Biotechnol, 2019 Oct;37(10):1155-1162
SubmissionRegistration date: 28-Mar-2019
Pacific Biosciences
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)2
SRA Experiments1
Publications
PubMed1
Other datasets
BioSample1
Variation (dbVar)30219
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases89
Data volume, Mbytes64257
This project encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Contigs

2
BioProject
accession
Assembly
level
OrganismTitle
PRJNA529552 ContigsHomo sapiensHighly-accurate long-read sequencing of HG002/NA24385 - De Novo Assembly (paternal) (Pacific Biosciences)
PRJNA529551 ContigsHomo sapiensHighly-accurate long-read sequencing of HG002/NA24385 - De Novo Assembly (maternal) (Pacific Biosciences)
Variation1
BioProject
accession
OrganismTitle
PRJNA520771Homo sapiensHighly-accurate long-read sequencing of HG002/NA24385 (Pacific Biosciences)

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