Junco hyemalis (ID 493001) - BioProject

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Accession: PRJNA493001 ID: 493001

Junco hyemalis (dark-eyed junco)

Junco hyemalis Genome sequencing and assembly

See Genome Information for Junco hyemalis

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6 additional projects are related by organism.

We sequenced a high quality genome of a Junco hyemalis specimen (Moore Laboratory of Zoology voucher number: MLZ:bird:69236) by combining shotgun and proximity ligation libraries at Dovetail Genomics, LLC. More...

Accession	PRJNA493001
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Junco hyemalis[Taxonomy ID: 40217] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Junco; Junco hyemalis
Publications	Friis G et al., "A high-quality genome assembly and annotation of the dark-eyed junco Junco hyemalis, a recently diversified songbird.", G3 (Bethesda), 2022 May 30;12(6) Friis G et al., "Genome-wide signals of drift and local adaptation during rapid lineage divergence in a songbird.", Mol Ecol, 2018 Dec;27(24):5137-5153
Submission	Registration date: 26-Nov-2018 National Museum of Natural Sciences
Related Resources	This genome is included in the B10K project
Relevance	Evolution
Locus Tag Prefix	D6013

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	32
WGS master	1
Genomic DNA	31
SRA Experiments	4
Publications
PubMed	2
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_003829775.2	Chromosome	QZWM00000000	31	SAMN10120167	Junco hyemalis

SRA Data Details

Parameter	Value
Data volume, Gbases	278
Data volume, Tbytes	0.13

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Junco hyemalis (dark-eyed junco)

Junco hyemalis Genome sequencing and assembly

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