subsurface metagenome (ID 414521) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJNA414521 ID: 414521

subsurface metagenome

subsurface metagenome Metagenome

Metagenome sequencing of microbial community from oil-prospecting borehole 5P in the region of the Chazhemto settlement, Tomsk oblast, Russia, drilled to a depth of 2.8 km.

Accession	PRJNA414521
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	subsurface metagenome[Taxonomy ID: 1564682] unclassified sequences; metagenomes; ecological metagenomes; subsurface metagenome
Publications	Kadnikov VV et al., "Complete Genome of a Member of a New Bacterial Lineage in the Microgenomates Group Reveals an Unusual Nucleotide Composition Disparity Between Two Strands of DNA and Limited Metabolic Potential.", Microorganisms, 2020 Feb 25;8(3)
Submission	Registration date: 18-Jan-2019 Research Center of Biotechnology RAS
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	64
WGS master	45
Genomic DNA	11
SRA Experiments	1
Protein Sequences	9252
Publications
PubMed	1
PMC	1
Other datasets
BioSample	54
Assembly	56

Assembly details:

Download

Assembly level

Number of Assemblies

7
1
45
53

Assembly	WGS	Chrs	BioSample	Isolate	Taxonomy
GCA_013178005.1	JABLXL000000000		SAMN14896052	Ch49	Actinomycetota bacterium
GCA_013178015.1	JABLXR000000000		SAMN14896060	Ch71	Anaerolineae bacterium
GCA_013178095.1	JABLXK000000000		SAMN14896049	Ch43	Anaerolineae bacterium
GCA_013178185.1	JABLXC000000000		SAMN14896036	Ch132	Anaerolineae bacterium
GCA_013178165.1	JABLXG000000000		SAMN14896041	Ch27	Anaerolineae bacterium
GCA_013178295.1	JABLWW000000000		SAMN14896021	Ch10	Anaerolineae bacterium
GCA_013177815.1	JABLXM000000000		SAMN14896053	Ch5	Anaerolineae bacterium
GCA_013314735.1	JABUFD000000000		SAMN14896062	Ch9	Anaerolineae bacterium
GCA_013178155.1	JABLXH000000000		SAMN14896046	Ch33	Armatimonadota bacterium
GCA_013314775.1	JABUFB000000000		SAMN14896020	Ch1	Armatimonadota bacterium
GCA_013178045.1	JABLXP000000000		SAMN14896058	Ch66	Bacillota bacterium
GCA_013177945.1	JABLXW000000000		SAMN14896035	Ch130	Bacillota bacterium
GCA_013178305.1	JABLXB000000000		SAMN14896032	Ch121	Bacillota bacterium
GCA_013178125.1	JABLXJ000000000		SAMN14896048	Ch40	Bacillota bacterium
GCA_013178105.1	JABLXI000000000		SAMN14896047	Ch38	Bacillota bacterium
GCA_013178275.1	JABLWZ000000000		SAMN14896027	Ch109	Bacillota bacterium
GCA_013178415.1	JABLXA000000000		SAMN14896029	Ch115	Bacillota bacterium
GCA_013314855.1	JABUEW000000000		SAMN14896051	Ch48	Bacillota bacterium
GCA_013540605.1	JABVCK000000000		SAMN14896043	Ch29	Bacillota bacterium
GCA_013314865.1	JABUEV000000000		SAMN14896039	Ch23	Bacteroidales bacterium
GCA_013314715.1	JABUFC000000000		SAMN14896056	Ch61	Bacteroidales bacterium
GCA_013178055.1	JABLXO000000000		SAMN14896057	Ch62	Bacteroidales bacterium
GCA_013177995.1	JABLXN000000000		SAMN14896055	Ch60	Brevinematales bacterium
GCA_013177895.1	JABLXV000000000		SAMN14896030	Ch117	Brevinematales bacterium
GCA_013178315.1	JABLWX000000000		SAMN14896022	Ch100	Candidatus Aminicenantes bacterium
GCA_004102645.1		1	SAMN10641986	Ch78	Candidatus Bipolaricaulis sibiricus
GCA_009936135.1		1	SAMN13865274	CH65	Candidatus Chazhemtobacterium aquaticus
GCA_013414795.1		1	SAMN14896054	Ch6	Candidatus Kapaibacterium sp.
GCA_004028775.1	RXGA00000000		SAMN10531977	Ch88	Candidatus Methanosuratincola subterraneus
GCA_013177805.1	JABLXU000000000		SAMN14896028	Ch114	Candidatus Omnitrophota bacterium
GCA_013314795.1	JABUEZ000000000		SAMN14896045	Ch31	Candidatus Profundicultor aquiphilus
GCA_013374855.1		1	SAMN14896023	Ch104a	Candidatus Woesebacteria bacterium
GCA_013374835.1		1	SAMN14896024	Ch104b	Candidatus Woesebacteria bacterium
GCA_013426185.1		1	SAMN14896025	Ch104c	Candidatus Woesebacteria bacterium
GCA_013314755.1	JABUFA000000000		SAMN14896031	Ch118	Chthonomonadia bacterium
GCA_013178255.1	JABLWY000000000		SAMN14896026	Ch108	Coprothermobacteraceae bacterium
GCA_013177925.1	JABLXS000000000		SAMN14896064	Ch94	Fervidobacterium sp.
GCA_013178375.1	JABLXQ000000000		SAMN14896059	Ch67	Gammaproteobacteria bacterium
GCA_013348845.1		1	SAMN14896033	Ch128a	Ignavibacteria bacterium
GCA_013177855.1	JABLYA000000000		SAMN14896034	Ch128b	Ignavibacteria bacterium
GCA_013403005.1	JACBOA000000000		SAMN15297293	Ch131b	Methanobacteriaceae archaeon
GCA_013402945.1	JACBNZ000000000		SAMN15297292	Ch131a	Methanobacteriaceae archaeon
GCA_013178175.1	JABLXF000000000		SAMN14896040	Ch26	Methanobacteriaceae archaeon
GCA_013178285.1	JABLXD000000000		SAMN14896037	Ch133	Methanofastidiosum sp.
GCA_013415865.1		1	SAMN14896050	Ch47	Methanomassiliicoccales archaeon
GCA_013177915.1	JABLXT000000000		SAMN14896065	Ch96	Methanothrix sp.
GCA_013178225.1	JABLXE000000000		SAMN14896038	Ch14	Methanotrichaceae archaeon
GCA_013178385.1	JABLWV000000000		SAMN14896066	Ch97	Pelotomaculum sp.
GCA_013177795.1	JABLXY000000000		SAMN14896044	Ch3	Syntrophaceae bacterium
GCA_013177825.1	JABLXX000000000		SAMN14896042	Ch28	Syntrophaceae bacterium
GCA_013314815.1	JABUEY000000000		SAMN14896061	Ch74	Syntrophobacteraceae bacterium
GCA_013314835.1	JABUEX000000000		SAMN14896067	Ch98	Syntrophothermus sp.
GCA_013177935.1	JABLXZ000000000		SAMN14896063	Ch92	candidate division WOR-3 bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	29
Data volume, Mbytes	14160

BioProject

Result Filters

Display Settings:

Send to:

subsurface metagenome

subsurface metagenome Metagenome

Supplemental Content

Related information

LinkOut to external resources

Recent activity