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Accession: PRJNA412458 ID: 412458

A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus [HiC_MEF] (house mouse)

See Genome Information for Mus musculus
The binding of the transcriptional regulator CTCF to the genome has been implicated in the formation of topologically associated domains (TADs). More...
AccessionPRJNA412458; GEO: GSE104367
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsBarutcu AR et al., "A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus.", Nat Commun, 2018 Apr 13;9(1):1444
SubmissionRegistration date: 28-Sep-2017
Donnelly Centre, University of Toronto
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments37
Publications
PubMed1
PMC1
Other datasets
BioSample37
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5490
SRA Data Details
ParameterValue
Data volume, Gbases787
Data volume, Tbytes0.37

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