Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA390465 ID: 390465

Mus musculus (house mouse)

Thiol-linked alkylation for the metabolic sequencing of RNA [SLAM-seq in wildtype and Xpo5 knockout mES cells]

See Genome Information for Mus musculus
Gene expression profiling by high-throughput sequencing reveals qualitative and quantitative changes in RNA species at steady-state but obscures the intracellular dynamics of RNA transcription, processing and decay. More...
AccessionPRJNA390465; GEO: GSE99973
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications
  • Neumann T et al., "Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets.", BMC Bioinformatics, 2019 May 20;20(1):258
  • Herzog VA et al., "Thiol-linked alkylation of RNA to assess expression dynamics.", Nat Methods, 2017 Dec;14(12):1198-1204
SubmissionRegistration date: 13-Jun-2017
Stefan Ameres, IMBA
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments18
Publications
PubMed2
PMC2
Other datasets
BioSample18
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes14
SRA Data Details
ParameterValue
Data volume, Gbases27
Data volume, Mbytes10306

Supplemental Content

Recent activity

  • Mus musculus
    Mus musculus
    Thiol-linked alkylation for the metabolic sequencing of RNA [SLAM-seq in wildtype and Xpo5 knockout mES cells]
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center