U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA387015 ID: 387015

bioreactor metagenome

Genome-resolved metagenomics of marine perchlorate-reducing communities

Metabolic interactions and genetic exchange are important features of microbial communities. More...
AccessionPRJNA387015
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismbioreactor metagenome[Taxonomy ID: 1076179]
unclassified sequences; metagenomes; ecological metagenomes; bioreactor metagenome
SubmissionRegistration date: 8-Jan-2018
University of California, Berkeley
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)11132
WGS master60
SRA Experiments20
Protein Sequences180340
Other datasets
BioSample70
Assembly60
Assembly details:
Assembly levelNumber of Assemblies
40
20
60
AssemblyLevelWGSBioSampleInfraspecies IdTaxonomy
GCA_002869105.1ContigPKTP00000000SAMN07982674
BM001
GCA_002869565.1ScaffoldPKUJ00000000SAMN07982695
BM102
GCA_002869535.1ScaffoldPKUK00000000SAMN07982696
BM504
GCA_002869045.1ScaffoldPKTS00000000SAMN07982677
BM101
GCA_007713545.1ContigVMRV00000000SAMN11950943
PHD
GCA_002869225.1ScaffoldPKTG00000000SAMN07982665
BM706
GCA_002869205.1ScaffoldPKTJ00000000SAMN07982668
BM521
GCA_002869165.1ContigPKTK00000000SAMN07982669
BM705
GCA_002869265.1ContigPKTH00000000SAMN07982666
BM507
GCA_002869235.1ScaffoldPKTI00000000SAMN07982667
BM519
GCA_002867475.1ScaffoldPKTL00000000SAMN07982670
BM511
GCA_002868855.1ContigPKUM00000000SAMN07982699
BM003
GCA_002869095.1ScaffoldPKTO00000000SAMN07982673
BM714
GCA_002869005.1ScaffoldPKTU00000000SAMN07982679
BM525
GCA_002869015.1ScaffoldPKTT00000000SAMN07982678
BM512
GCA_007713435.1ContigVMRW00000000SAMN11950944
SFB-4
GCA_007713525.1ContigVMRR00000000SAMN11950939
B5
GCA_007713535.1ContigVMRU00000000SAMN11950942
SFB-5
GCA_007625205.1ContigVMNI00000000SAMN11950935
SFB-1
GCA_007625155.1ContigVMNK00000000SAMN11950937
SFB-3
GCA_007625125.1ContigVMNJ00000000SAMN11950936
SFB-2
GCA_002869145.1ScaffoldPKTM00000000SAMN07982671
BM701
GCA_002869185.1ScaffoldPKTN00000000SAMN07982672
BM704
GCA_002868985.1ScaffoldPKTV00000000SAMN07982681
BM005
GCA_002899795.1ScaffoldPPDG00000000SAMN07982680
BM002
GCA_002868955.1ContigPKTW00000000SAMN07982682
BM004
GCA_002868945.1ScaffoldPKTX00000000SAMN07982683
BM506
GCA_002868925.1ScaffoldPKTZ00000000SAMN07982685
BM302
GCA_002868905.1ContigPKUA00000000SAMN07982686
BM304
GCA_002868865.1ScaffoldPKUC00000000SAMN07982688
BM508
GCA_002868845.1ScaffoldPKUB00000000SAMN07982687
BM501
GCA_002869725.1ScaffoldPKTY00000000SAMN07982684
BM103
GCA_002869695.1ScaffoldPKUD00000000SAMN07982689
BM509
GCA_002869685.1ScaffoldPKUE00000000SAMN07982690
BM513
GCA_002869665.1ScaffoldPKUG00000000SAMN07982692
BM522
GCA_002869605.1ScaffoldPKUI00000000SAMN07982694
BM709
GCA_002869635.1ScaffoldPKUF00000000SAMN07982691
BM515
GCA_002869615.1ScaffoldPKUH00000000SAMN07982693
BM707
GCA_002869085.1ScaffoldPKTQ00000000SAMN07982675
BM303
GCA_002869065.1ContigPKTR00000000SAMN07982676
BM505
GCA_002869275.1ScaffoldPKTF00000000SAMN07982664
BM516
GCA_002869465.1ScaffoldPKSW00000000SAMN07982655
BM514
GCA_002869315.1ScaffoldPKTD00000000SAMN07982662
BM719
GCA_002869305.1ScaffoldPKTC00000000SAMN07982661
BM718
GCA_002869435.1ScaffoldPKSX00000000SAMN07982656
BM518
GCA_002869425.1ScaffoldPKSZ00000000SAMN07982658
BM523
GCA_002869405.1ScaffoldPKSY00000000SAMN07982657
BM520
GCA_002869385.1ScaffoldPKTB00000000SAMN07982660
BM703
GCA_002869365.1ScaffoldPKTA00000000SAMN07982659
BM524
GCA_007713625.1ContigVMRX00000000SAMN11950945
UCB
GCA_007713455.1ContigVMRT00000000SAMN11950941
CAL
GCA_002869335.1ScaffoldPKTE00000000SAMN07982663
BM715
GCA_002868805.1ScaffoldPKUN00000000SAMN07982700
BM301
GCA_007713585.1ContigVMRS00000000SAMN11950940
BK-2
GCA_007625115.1ContigVMNH00000000SAMN11950934
BK-1
GCA_002869585.1ContigPKUO00000000SAMN07982701
BM503
GCA_007713595.1ContigVMRY00000000SAMN11950946
BK-3
GCA_002869525.1ScaffoldPKUL00000000SAMN07982698
BM702
GCA_002899765.1ScaffoldPPDH00000000SAMN07982697
BM502
GCA_002868815.1ScaffoldPKUP00000000SAMN07982702
BM517
SRA Data Details
ParameterValue
Data volume, Gbases49
Data volume, Mbytes23176

Supplemental Content

Recent activity

  • bioreactor metagenome
    bioreactor metagenome
    Genome-resolved metagenomics of marine perchlorate-reducing communities
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center