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Accession: PRJNA363019 ID: 363019

Chromatin structure alteration regulates key transcription factor expression during blood cell differentiation

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA363019; GEO: GSE93997
TypeUmbrella project
PublicationsLi Y et al., "Alterations of specific chromatin conformation affect ATRA-induced leukemia cell differentiation.", Cell Death Dis, 2018 Feb 8;9(2):200
SubmissionRegistration date: 24-Jan-2017
Tsinghua University
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments20
Publications
PubMed1
PMC1
Other datasets
BioSample20
GEO DataSets5
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3081
SRA Data Details
ParameterValue
Data volume, Gbases255
Data volume, Tbytes0.12
Chromatin structure alteration regulates key transcription factor expression during blood cell differentiation encompasses the following 4 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA363022Homo sapiensGenome-wide maps of chromatin state ATRA treated and control HL-60 cells [ChIP-seq] (Tsinghua University)
Other2
BioProject
accession
OrganismTitle
PRJNA363021Homo sapiensGenome-wide Studies of Chromatin Structure during Blood Cell Differentiation [HiC-seq] (Tsinghua University)
PRJNA363023Homo sapiensAssay for Transposase-Accessible Chromatin of ATRA treated and wild type HL-60 cell line [ATAC-seq] (Tsinghua University)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA363025Homo sapiensDifferential Gene Expression between ATRA treated and control HL-60 Cells [RNA-seq] (Tsinghua University)

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