Trichoplusia ni isolate:ovarian cell line Hi5 (ID 336361) - BioProject

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Accession: PRJNA336361 ID: 336361

Trichoplusia ni isolate:ovarian cell line Hi5 (cabbage looper)

See Genome Information for Trichoplusia ni

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16 additional projects are related by organism.

We assembled the Trichoplus ni genome to establish the animal and the ovarian cell line Hi5 as a new model for studying small RNAs.

Accession	PRJNA336361
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Trichoplusia ni[Taxonomy ID: 7111] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Altocrustacea; Allotriocarida; Hexapoda; Insecta; Pterygota; Neoptera; Eumetabola; Endopterygota; Aparaglossata; Panorpida; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia; Trichoplusia ni
Publications	Fu Y et al., "The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology.", Elife, 2018 Jan 29;7
Submission	Registration date: 5-Feb-2018 University of Massachusetts Medical School
Relevance	Model Organism

Project Data:

Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_003590095.1	Chromosome	NKQN00000000	29	SAMN07304761	Trichoplusia ni

Parameter	Value
Data volume, Gbases	516
Data volume, Tbytes	0.28

Related RefSeq Project

PRJNA497582 : Trichoplusia ni isolate:ovarian cell line Hi5 RefSeq Genome sequencing and assembly

Supplemental Content

GOLD: Gp0443841 [Genomes On Line Database]
GOLD: Gp0443841
Genomes On Line Database
GOLD: Gp0443841 [Genomes On Line Database]
GOLD: Gp0443841
Genomes On Line Database
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

Trichoplusia ni isolate:ovarian cell line Hi5
Trichoplusia ni isolate:ovarian cell line Hi5
Trichoplusia ni isolate:ovarian cell line Hi5 Genome sequencing and assembly

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