RNA-Seq data for adult females of the calanoid copepod Neocalanus flemingeri (Crustacea) collected over multiple years in the Gulf of Alaska. Data have been used to generate a de novo transcriptome and to perform gene expression studies.
| Accession | PRJNA324453 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Neocalanus flemingeri[Taxonomy ID: 119369] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Hexanauplia; Copepoda; Calanoida; Calanidae; Neocalanus; Neocalanus flemingeri |
| Publications (total 4) Less... | - Roncalli V et al., "De novo transcriptome assembly of the calanoid copepod Neocalanus flemingeri: A new resource for emergence from diapause.", Mar Genomics, 2018 Feb;37:114-119
More...- Roncalli V et al., "De novo transcriptome assembly of the calanoid copepod Neocalanus flemingeri: A new resource for emergence from diapause.", Mar Genomics, 2018 Feb;37:114-119
- Roncalli V et al., "Physiological characterization of the emergence from diapause: A transcriptomics approach.", Sci Rep, 2018 Aug 22;8(1):12577
- Published online: Lenz P et al., "Diapause within the Context of Life-History Strategies in Calanid Copepods (Calanoida: Crustacea)", The Biological Bulletin, 2019;237(2):170-179
- Published online: Roncalli V et al., "Capital Breeding in a Diapausing Copepod: A Transcriptomics Analysis", Frontiers in Marine Science, 2020;7
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| Grants | - "Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska" (Grant ID OCE-1459235, National Science Foundation)
- "Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska" (Grant ID OCE-1459826, National Science Foundation)
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| Submission | Registration date: 3-Jun-2016
University of Hawaii at Manoa |
| Relevance | Environmental |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (TSA master) | 1 |
| SRA Experiments | 175 |
| Publications |
| PubMed | 2 |
| PMC | 1 |
| Other datasets |
| BioSample | 46 |