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Accession: PRJNA305749 ID: 305749

Bacterial degraders of HMW DOM

Bacterial degraders of HMW DOM Genome sequencing and assembly

Screen and identify cultures obtained from dilution-to-extinction cultivation experiments enriched with high-molecular-weight (HMW) dissolved organic matter (DOM).
AccessionPRJNA305749
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "Investigating dissolved organic matter in the microbial loop" (Grant ID GBMF3298, Gordon and Betty Moore Foundation)
SubmissionRegistration date: 11-Dec-2015
Massachusetts Institute of Technology
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)99228
WGS master59
SRA Experiments74
Protein Sequences232206
Other datasets
BioSample78
Assembly59
Assembly details:
Assembly levelNumber of Assemblies
59
59
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001635515.1ContigLWEI00000000SAMN04580756
HI0003
GCA_001635525.1ContigLWEJ00000000SAMN04580757
HI0007
GCA_001635565.1ContigLWEL00000000SAMN04580759
HI0011
GCA_001634705.1ContigLWEM00000000SAMN04580760
HI0013
GCA_001634835.1ContigLWET00000000SAMN04580767
HI0033
GCA_001634855.1ContigLWEU00000000SAMN04580768
HI0035
GCA_001634945.1ContigLWEZ00000000SAMN04580773
HI0044
GCA_001635175.1ContigLWFX00000000SAMN04580797
HI0083
GCA_001634695.1ContigLWEN00000000SAMN04580761
HI0019
GCA_001634715.1ContigLWEO00000000SAMN04580762
HI0020
GCA_001634795.1ContigLWES00000000SAMN04580766
HI0028
GCA_001634865.1ContigLWEV00000000SAMN04580769
HI0037
GCA_001634875.1ContigLWEW00000000SAMN04580770
HI0038
GCA_001635685.1ContigLWFF00000000SAMN04580779
HI0063
GCA_001634995.1ContigLWFO00000000SAMN04580788
HI0074
GCA_001635065.1ContigLWFR00000000SAMN04580791
HI0077
GCA_001635465.1ContigLWEG00000000SAMN04580754
HI00D59
GCA_001635445.1ContigLWEE00000000SAMN04580752
HI00S01
GCA_001635005.1ContigLWFP00000000SAMN04580789
HI0075
GCA_001635535.1ContigLWEK00000000SAMN04580758
HI0009
GCA_001634935.1ContigLWEY00000000SAMN04580772
HI0043
GCA_001635615.1ContigLWFB00000000SAMN04580775
HI0050
GCA_001635675.1ContigLWFE00000000SAMN04580778
HI0061
GCA_001635715.1ContigLWFG00000000SAMN04580780
HI0065
GCA_001635725.1ContigLWFH00000000SAMN04580781
HI0066
GCA_001635735.1ContigLWFI00000000SAMN04580782
HI0067
GCA_001635765.1ContigLWFJ00000000SAMN04580783
HI0068
GCA_001635795.1ContigLWFK00000000SAMN04580784
HI0069
GCA_001635805.1ContigLWFL00000000SAMN04580785
HI0071
GCA_001634975.1ContigLWFM00000000SAMN04580786
HI0072
GCA_001634985.1ContigLWFN00000000SAMN04580787
HI0073
GCA_001635075.1ContigLWFS00000000SAMN04580792
HI0078
GCA_001635105.1ContigLWFT00000000SAMN04580793
HI0079
GCA_001635135.1ContigLWFU00000000SAMN04580794
HI0080
GCA_001635145.1ContigLWFV00000000SAMN04580795
HI0081
GCA_001635215.1ContigLWFY00000000SAMN04580798
HI0085
GCA_001635225.1ContigLWFZ00000000SAMN04580799
HI0086
GCA_001635235.1ContigLWGA00000000SAMN04580800
HI0117
GCA_001635265.1ContigLWGB00000000SAMN04580801
HI0118
GCA_001635305.1ContigLWGD00000000SAMN04580803
HI0122
GCA_001635315.1ContigLWGE00000000SAMN04580804
HI0123
GCA_001635355.1ContigLWGF00000000SAMN04580805
HI0125
GCA_001635365.1ContigLWGG00000000SAMN04580806
HI0128
GCA_001635385.1ContigLWGI00000000SAMN04580808
HI0130
GCA_001635845.1ContigLWGJ00000000SAMN04580809
HI0132
GCA_001635835.1ContigLWGK00000000SAMN04580810
HI0133
GCA_001635595.1ContigLWFC00000000SAMN04580776
HI0053
GCA_001635435.1ContigLWEF00000000SAMN04580753
HI00D01
GCA_001635625.1ContigLWFA00000000SAMN04580774
HI0049
GCA_001634725.1ContigLWEP00000000SAMN04580763
HI0021
GCA_001634785.1ContigLWEQ00000000SAMN04580764
HI0023
GCA_001634775.1ContigLWER00000000SAMN04580765
HI0027
GCA_001634885.1ContigLWEX00000000SAMN04580771
HI0040
GCA_001635605.1ContigLWFD00000000SAMN04580777
HI0054
GCA_001635055.1ContigLWFQ00000000SAMN04580790
HI0076
GCA_001635155.1ContigLWFW00000000SAMN04580796
HI0082
GCA_001635395.1ContigLWGH00000000SAMN04580807
HI0129
GCA_001635285.1ContigLWGC00000000SAMN04580802
HI0120
GCA_001635455.1ContigLWEH00000000SAMN04580755
HI00D65
SRA Data Details
ParameterValue
Data volume, Gbases6
Data volume, Mbytes3395

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