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Accession: PRJNA304199 ID: 304199

Oenococcus oeni

Genetic diversity in Oenococcus oeni revealed through multi-strain genome sequencing

See Genome Information for Oenococcus oeni
Oenococcus oeni, a member of the lactic acid bacteria, is one of a limited number of bacterial species that can not only survive, but also actively grow in wine. More...
AccessionPRJNA304199
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismOenococcus oeni[Taxonomy ID: 1247]
Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Oenococcus; Oenococcus oeni
PublicationsSternes PR et al., "Consensus pan-genome assembly of the specialised wine bacterium Oenococcus oeni.", BMC Genomics, 2016 Apr 27;17:308
SubmissionRegistration date: 7-Nov-2016
Australian Wine Research Institute
RelevanceIndustrial
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)52288
WGS master140
SRA Experiments142
Protein Sequences247477
Publications
PubMed1
PMC1
Other datasets
BioSample142
Assembly140
Assembly details:
Assembly levelNumber of Assemblies
140
140
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001939495.1ContigMLNF00000000SAMN04297071
AWRIB435
GCA_001939485.1ContigMLPG00000000SAMN04297124
AWRIB867
GCA_001939445.1ContigMLMM00000000SAMN04297052
AWRIB337
GCA_001939435.1ContigMLMA00000000SAMN04297040
AWRIB324
GCA_001939425.1ContigMLKY00000000SAMN04297012
AWRIB121
GCA_001939365.1ContigMLOO00000000SAMN04297106
AWRIB706
GCA_001939355.1ContigMLOQ00000000SAMN04297108
AWRIB710
GCA_001939345.1ContigMLLG00000000SAMN04297020
AWRIB133
GCA_001939375.1ContigMLMD00000000SAMN04297043
AWRIB328
GCA_001869695.1ContigMLPA00000000SAMN04297118
AWRIB845
GCA_001869685.1ContigMLOZ00000000SAMN04297117
AWRIB821
GCA_001869655.1ContigMLOY00000000SAMN04297116
AWRIB819
GCA_001869645.1ContigMLOS00000000SAMN04297110
AWRIB713
GCA_001869775.1ContigMLPE00000000SAMN04297122
AWRIB863
GCA_001869765.1ContigMLPD00000000SAMN04297121
AWRIB858
GCA_001869735.1ContigMLPC00000000SAMN04297120
AWRIB853
GCA_001869725.1ContigMLPB00000000SAMN04297119
AWRIB847
GCA_001869565.1ContigMLOJ00000000SAMN04297101
AWRIB634
GCA_001869535.1ContigMLOF00000000SAMN04297097
AWRIB619
GCA_001869525.1ContigMLNX00000000SAMN04297089
AWRIB503
GCA_001869615.1ContigMLOR00000000SAMN04297109
AWRIB712
GCA_001869605.1ContigMLOL00000000SAMN04297103
AWRIB663
GCA_001869575.1ContigMLOK00000000SAMN04297102
AWRIB661
GCA_001870035.1ContigMLPX00000000SAMN04297143
AWRIB950
GCA_001870015.1ContigMLPV00000000SAMN04297141
AWRIB900
GCA_001870005.1ContigMLPU00000000SAMN04297140
AWRIB899
GCA_001869855.1ContigMLPM00000000SAMN04297131
AWRIB882
GCA_001869845.1ContigMLPI00000000SAMN04297127
AWRIB873
GCA_001869815.1ContigMLPH00000000SAMN04297125
AWRIB868
GCA_001869805.1ContigMLPF00000000SAMN04297123
AWRIB864
GCA_001869985.1ContigMLPS00000000SAMN04297137
AWRIB889
GCA_001869935.1ContigMLPR00000000SAMN04297136
AWRIB888
GCA_001869945.1ContigMLPQ00000000SAMN04297135
AWRIB887
GCA_001869925.1ContigMLPP00000000SAMN04297134
AWRIB885
GCA_001869905.1ContigMLPO00000000SAMN04297133
AWRIB884
GCA_001869885.1ContigMLPN00000000SAMN04297132
AWRIB883
GCA_001869505.1ContigMLOE00000000SAMN04297096
AWRIB583
GCA_001869485.1ContigMLNY00000000SAMN04297090
AWRIB508
GCA_001869465.1ContigMLNT00000000SAMN04297085
AWRIB467
GCA_001869445.1ContigMLNS00000000SAMN04297084
AWRIB465
GCA_001869405.1ContigMLNQ00000000SAMN04297082
AWRIB461
GCA_001869395.1ContigMLNP00000000SAMN04297081
AWRIB460
GCA_001869375.1ContigMLNK00000000SAMN04297076
AWRIB445
GCA_001869365.1ContigMLNJ00000000SAMN04297075
AWRIB442
GCA_001869235.1ContigMLPK00000000SAMN04297129
AWRIB879
GCA_001869245.1ContigMLOW00000000SAMN04297114
AWRIB794
GCA_001869225.1ContigMLPJ00000000SAMN04297128
AWRIB875
GCA_001869325.1ContigMLPY00000000SAMN04297144
AWRIB984
GCA_001869305.1ContigMLPW00000000SAMN04297142
AWRIB949
GCA_001869295.1ContigMLPT00000000SAMN04297138
AWRIB897
GCA_001869285.1ContigMLPL00000000SAMN04297130
AWRIB880
GCA_001869205.1ContigMLOX00000000SAMN04297115
AWRIB816
GCA_001868975.1ContigMLOD00000000SAMN04297095
AWRIB581
GCA_001868925.1ContigMLOA00000000SAMN04297092
AWRIB540
GCA_001869015.1ContigMLOG00000000SAMN04297098
AWRIB621
GCA_001869005.1ContigMLOB00000000SAMN04297093
AWRIB541
GCA_001868965.1ContigMLOC00000000SAMN04297094
AWRIB565
GCA_001869165.1ContigMLOV00000000SAMN04297113
AWRIB791
GCA_001869135.1ContigMLOT00000000SAMN04297111
AWRIB714
GCA_001869155.1ContigMLOU00000000SAMN04297112
AWRIB787
GCA_001869125.1ContigMLOP00000000SAMN04297107
AWRIB708
GCA_001869085.1ContigMLOH00000000SAMN04297099
AWRIB625
GCA_001869055.1ContigMLOM00000000SAMN04297104
AWRIB670
GCA_001869045.1ContigMLOI00000000SAMN04297100
AWRIB629
GCA_001869065.1ContigMLON00000000SAMN04297105
AWRIB683
GCA_001868785.1ContigMLNN00000000SAMN04297079
AWRIB454
GCA_001868715.1ContigMLNL00000000SAMN04297077
AWRIB446
GCA_001868915.1ContigMLNZ00000000SAMN04297091
AWRIB509
GCA_001868905.1ContigMLNW00000000SAMN04297088
AWRIB494
GCA_001868875.1ContigMLNV00000000SAMN04297087
AWRIB492
GCA_001868865.1ContigMLNU00000000SAMN04297086
AWRIB490
GCA_001868825.1ContigMLNO00000000SAMN04297080
AWRIB459
GCA_001868815.1ContigMLNR00000000SAMN04297083
AWRIB462
GCA_001868805.1ContigMLNM00000000SAMN04297078
AWRIB447
GCA_001868655.1ContigMLNH00000000SAMN04297073
AWRIB438
GCA_001868635.1ContigMLNE00000000SAMN04297070
AWRIB433
GCA_001868625.1ContigMLND00000000SAMN04297069
AWRIB432
GCA_001868595.1ContigMLNB00000000SAMN04297067
AWRIB430
GCA_001868575.1ContigMLMX00000000SAMN04297063
AWRIB398
GCA_001868555.1ContigMLNA00000000SAMN04297066
AWRIB424
GCA_001868545.1ContigMLMZ00000000SAMN04297065
AWRIB402
GCA_001868525.1ContigMLMS00000000SAMN04297058
AWRIB345
GCA_001868495.1ContigMLMR00000000SAMN04297057
AWRIB344
GCA_001868485.1ContigMLMN00000000SAMN04297053
AWRIB338
GCA_001868445.1ContigMLME00000000SAMN04297044
AWRIB329
GCA_001868435.1ContigMLML00000000SAMN04297051
AWRIB336
GCA_001868425.1ContigMLMK00000000SAMN04297050
AWRIB335
GCA_001868405.1ContigMLMJ00000000SAMN04297049
AWRIB334
GCA_001868375.1ContigMLMG00000000SAMN04297046
AWRIB331
GCA_001868355.1ContigMLMC00000000SAMN04297042
AWRIB327
GCA_001868345.1ContigMLMB00000000SAMN04297041
AWRIB326
GCA_001868315.1ContigMLLZ00000000SAMN04297039
AWRIB323
GCA_001868285.1ContigMLLY00000000SAMN04297038
AWRIB322
GCA_001868275.1ContigMLLX00000000SAMN04297037
AWRIB316
GCA_001868265.1ContigMLLS00000000SAMN04297032
AWRIB215
GCA_001868225.1ContigMLLO00000000SAMN04297028
AWRIB151
GCA_001868205.1ContigMLLN00000000SAMN04297027
AWRIB150
GCA_001868195.1ContigMLLL00000000SAMN04297025
AWRIB147
GCA_001868185.1ContigMLLK00000000SAMN04297024
AWRIB141
GCA_001868125.1ContigMLLC00000000SAMN04297016
AWRIB128
GCA_001868145.1ContigMLLE00000000SAMN04297018
AWRIB131
GCA_001868115.1ContigMLLB00000000SAMN04297015
AWRIB127
GCA_001868105.1ContigMLLA00000000SAMN04297014
AWRIB126
GCA_001868055.1ContigMLKX00000000SAMN04297011
AWRIB118
GCA_001868045.1ContigMLKW00000000SAMN04297010
AWRIB117
GCA_001868025.1ContigMLNC00000000SAMN04297068
AWRIB431
GCA_001868035.1ContigMLNG00000000SAMN04297072
AWRIB436
GCA_001867975.1ContigMLMY00000000SAMN04297064
AWRIB401
GCA_001867965.1ContigMLMW00000000SAMN04297062
AWRIB394
GCA_001867945.1ContigMLMU00000000SAMN04297060
AWRIB391
GCA_001867955.1ContigMLMV00000000SAMN04297061
AWRIB392
GCA_001867915.1ContigMLMT00000000SAMN04297059
AWRIB346
GCA_001867895.1ContigMLMQ00000000SAMN04297056
AWRIB343
GCA_001867875.1ContigMLMP00000000SAMN04297055
AWRIB342
GCA_001867865.1ContigMLMO00000000SAMN04297054
AWRIB341
GCA_001867835.1ContigMLMI00000000SAMN04297048
AWRIB333
GCA_001867805.1ContigMLMH00000000SAMN04297047
AWRIB332
GCA_001867795.1ContigMLMF00000000SAMN04297045
AWRIB330
GCA_001867785.1ContigMLLW00000000SAMN04297036
AWRIB241
GCA_001867765.1ContigMLLV00000000SAMN04297035
AWRIB240
GCA_001867735.1ContigMLLU00000000SAMN04297034
AWRIB217
GCA_001867715.1ContigMLLT00000000SAMN04297033
AWRIB216
GCA_001867695.1ContigMLLR00000000SAMN04297031
AWRIB214
GCA_001867685.1ContigMLLQ00000000SAMN04297030
AWRIB203
GCA_001867655.1ContigMLLI00000000SAMN04297022
AWRIB136
GCA_001867635.1ContigMLLP00000000SAMN04297029
AWRIB156
GCA_001867615.1ContigMLLM00000000SAMN04297026
AWRIB148
GCA_001867605.1ContigMLLJ00000000SAMN04297023
AWRIB138
GCA_001867585.1ContigMLLH00000000SAMN04297021
AWRIB134
GCA_001867535.1ContigMLLD00000000SAMN04297017
AWRIB130
GCA_001867555.1ContigMLLF00000000SAMN04297019
AWRIB132
GCA_001867525.1ContigMLKZ00000000SAMN04297013
AWRIB124
GCA_001867485.1ContigMLKV00000000SAMN04297009
AWRIB1119
GCA_001867475.1ContigMLKU00000000SAMN04297008
AWRIB1118
GCA_001867465.1ContigMLKT00000000SAMN04297007
AWRIB1116
GCA_001867445.1ContigMLKS00000000SAMN04297006
AWRIB1064
GCA_001867405.1ContigMLKR00000000SAMN04297005
AWRIB1063
GCA_001867395.1ContigMLKQ00000000SAMN04297004
AWRIB1062
GCA_001867355.1ContigMLKP00000000SAMN04297003
AWRIB1059
GCA_001868675.1ContigMLNI00000000SAMN04297074
AWRIB441
SRA Data Details
ParameterValue
Data volume, Gbases18
Data volume, Mbytes10138

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    Genetic diversity in Oenococcus oeni revealed through multi-strain genome sequencing
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