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Accession: PRJNA30071 ID: 30071

Helicobacter canadensis MIT 98-5491

reference genome for the Human Microbiome Project

See Genome Information for Helicobacter canadensis

Helicobacter canadensis MIT 98-5491. Helicobacter canadensis MIT 98-5491 (ATCC 700968) was isolated from a human with diarrhea. This strain is being sequenced as a reference for the Human Microbiome Project (HMP).

AccessionPRJNA30071
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismHelicobacter canadensis MIT 98-5491[Taxonomy ID: 537970]
Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter canadensis; Helicobacter canadensis MIT 98-5491
Publications
  • Shen Z et al., "Draft genome sequences of six enterohepatic helicobacter┬áspecies isolated from humans and one from rhesus macaques.", Genome Announc, 2014 Sep 11;2(5)
  • Fox JG et al., "Helicobacter canadensis sp. nov. isolated from humans with diarrhea as an example of an emerging pathogen.", J Clin Microbiol, 2000 Jul;38(7):2546-9
SubmissionRegistration date: 26-Aug-2008
Locus Tag PrefixHCMG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)150
WGS master1
SRA Experiments6
Protein Sequences1627
Publications
PubMed2
PMC2
Other datasets
BioSample2
Assembly1
SRA Data Details
ParameterValue
Data volume, Mbases99
Data volume, Mbytes245

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