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Accession: PRJNA294421 ID: 294421

biofilm metagenome

Chloraminated Drinking Water Distribution System Simulator

Many US water treatment facilities use chloramination to control disinfectant by-product formation. More...
AccessionPRJNA294421
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismbiofilm metagenome[Taxonomy ID: 718308]
unclassified sequences; metagenomes; ecological metagenomes; biofilm metagenome
Publications (total 3)
  • Gomez-Alvarez V et al., "Draft Genome Sequence of Two Sphingopyxis sp. Strains, Dominant Members of the Bacterial Community Associated with a Drinking Water Distribution System Simulator.", Genome Announc, 2016 Mar 31;4(2)
More...
SubmissionRegistration date: 22-Sep-2015
US EPA
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4880
WGS master50
SRA Experiments469
Protein Sequences266250
Publications
PubMed3
PMC3
Other datasets
BioSample286
Assembly50
Assembly details:
Assembly levelNumber of Assemblies
50
50
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001296245.1ContigLJFQ00000000SAMN04025494
H068
GCA_001296255.1ContigLJFR00000000SAMN04025495
H074
GCA_001296385.1ContigLJFV00000000SAMN04025499
H106
GCA_001296345.1ContigLJFT00000000SAMN04025497
H088
GCA_001296325.1ContigLJFS00000000SAMN04025496
H076
GCA_001296335.1ContigLJFX00000000SAMN04025501
HXV
GCA_001296265.1ContigLJFP00000000SAMN04025493
H060
GCA_001296275.1ContigLJFO00000000SAMN04025492
H008
GCA_001296425.1ContigLJFY00000000SAMN04025502
HXXI
GCA_001296405.1ContigLJFW00000000SAMN04025500
H113
GCA_001296415.1ContigLJFU00000000SAMN04025498
H097
GCA_001440005.1ContigLJYH00000000SAMN04091131
H001
GCA_001440085.1ContigLJYI00000000SAMN04091132
H002
GCA_001440135.1ContigLJYL00000000SAMN04091147
H003
GCA_001440125.1ContigLJYJ00000000SAMN04091133
H054
GCA_001440155.1ContigLJYM00000000SAMN04091148
H063
GCA_001440185.1ContigLJYN00000000SAMN04091149
H070
GCA_001440105.1ContigLJYK00000000SAMN04091134
H072
GCA_001440205.1ContigLJYO00000000SAMN04091150
H079
GCA_001440225.1ContigLJYP00000000SAMN04091151
H092
GCA_001440245.1ContigLJYQ00000000SAMN04091152
H101
GCA_001440265.1ContigLJYR00000000SAMN04091153
H110
GCA_001440275.1ContigLJYS00000000SAMN04091154
HXVII
GCA_001440305.1ContigLJYT00000000SAMN04091155
HXXIII
GCA_001468495.1ContigLNSK00000000SAMN04256164
A083
GCA_001467395.1ContigLNRR00000000SAMN04252877
H005
GCA_001468235.1ContigLNRS00000000SAMN04252878
H012
GCA_001467405.1ContigLNRT00000000SAMN04252879
H038
GCA_001468265.1ContigLNRZ00000000SAMN04255394
H050
GCA_001468225.1ContigLNRU00000000SAMN04252880
H053
GCA_001468315.1ContigLNSD00000000SAMN04256157
H057
GCA_001468345.1ContigLNSE00000000SAMN04256158
H067
GCA_001468365.1ContigLNSF00000000SAMN04256159
H071
GCA_001468395.1ContigLNSG00000000SAMN04256160
H073
GCA_001467445.1ContigLNRV00000000SAMN04252881
H077
GCA_001467455.1ContigLNRW00000000SAMN04252882
H080
GCA_001468385.1ContigLNSH00000000SAMN04256161
H081
GCA_001467385.1ContigLNRX00000000SAMN04252883
H085
GCA_001467475.1ContigLNRY00000000SAMN04252884
H093
GCA_001468425.1ContigLNSI00000000SAMN04256162
H100
GCA_001468475.1ContigLNSJ00000000SAMN04256163
H107
GCA_001468465.1ContigLNSA00000000SAMN04256113
H115
GCA_001468285.1ContigLNSB00000000SAMN04256143
HIX
GCA_001468305.1ContigLNSC00000000SAMN04256144
HXXIV
GCA_001399625.1ContigLKTY00000000SAMN04146767
H108
GCA_001399545.1ContigLKTV00000000SAMN04146764
H084
GCA_001399595.1ContigLKTX00000000SAMN04146766
H095
GCA_001399565.1ContigLKTW00000000SAMN04146765
H090
GCA_001399555.1ContigLKTZ00000000SAMN04146768
H112
GCA_001401735.1ContigLKTU00000000SAMN04146763
H061
SRA Data Details
ParameterValue
Data volume, Gbases5
Data volume, Mbytes2486

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  • biofilm metagenome
    biofilm metagenome
    Chloraminated Drinking Water Distribution System Simulator
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