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Accession: PRJNA292736 ID: 292736

Streptococcus pyogenes

Skin Sore Trial Household Cluster Study - Streptococcus pyogenes

See Genome Information for Streptococcus pyogenes
Streptococcus pyogenes isolated from pyoderma to investigate transmission within and between households in a remote Indigenous community setting.
AccessionPRJNA292736
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismStreptococcus pyogenes[Taxonomy ID: 1314]
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pyogenes
SubmissionRegistration date: 6-May-2016
Menzies School of Health Research
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1320
WGS master31
SRA Experiments31
Protein Sequences50500
Other datasets
BioSample31
Assembly31
Assembly details:
Assembly levelNumber of Assemblies
19
12
31
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001638885.1ContigLRHH00000000SAMN03988142
SST2242-1
GCA_001638895.1ScaffoldLRHI00000000SAMN03988120
SST2243-1
GCA_001638865.1ScaffoldLRHJ00000000SAMN03988122
SST2245-1
GCA_001638265.1ContigLRGP00000000SAMN03988136
SST2093-1
GCA_001638805.1ScaffoldLRHG00000000SAMN03988130
SST2241-1
GCA_001638775.1ScaffoldLRHF00000000SAMN03988129
SST2240-1
GCA_001638755.1ContigLRHE00000000SAMN03988148
SST2238-1
GCA_001638745.1ScaffoldLRHC00000000SAMN03988147
SST2236-1
GCA_001638725.1ScaffoldLRHA00000000SAMN03988145
SST2233-1
GCA_001638695.1ScaffoldLRHD00000000SAMN03988119
SST2237-1
GCA_001638675.1ScaffoldLRHB00000000SAMN03988146
SST2235-1
GCA_001638655.1ContigLRGY00000000SAMN03988128
SST2229-1
GCA_001638645.1ScaffoldLRGZ00000000SAMN03988124
SST2232-1
GCA_001638625.1ContigLRGX00000000SAMN03988133
SST2103-1
GCA_001638585.1ScaffoldLRGW00000000SAMN03988132
SST2102-1
GCA_001638565.1ContigLRGT00000000SAMN03988127
SST2097-1
GCA_001638575.1ScaffoldLRGV00000000SAMN03988131
SST2099-1
GCA_001638545.1ScaffoldLRGU00000000SAMN03988141
SST2098-1
GCA_001638525.1ContigLRGQ00000000SAMN03988137
SST2094-1
GCA_001638505.1ContigLRGO00000000SAMN03988135
SST2092-1
GCA_001638485.1ScaffoldLRGS00000000SAMN03988126
SST2096-1
GCA_001638465.1ContigLRGL00000000SAMN03988144
SST2088-1
GCA_001638435.1ScaffoldLRGK00000000SAMN03988118
SST1028-1
GCA_001638415.1ContigLRGN00000000SAMN03988134
SST2091-1
GCA_001638405.1ScaffoldLRGJ00000000SAMN03988123
SST1024-1
GCA_001638385.1ScaffoldLRGI00000000SAMN03988121
SST1023-1
GCA_001638345.1ScaffoldLRGH00000000SAMN03988140
SST1021-1
GCA_001638325.1ScaffoldLRGG00000000SAMN03988139
SST1020-1
GCA_001638335.1ContigLRGF00000000SAMN03988143
SST1019-1
GCA_001638255.1ContigLRGM00000000SAMN03988125
SST2090-1
GCA_001638275.1ScaffoldLRGR00000000SAMN03988138
SST2095-1
SRA Data Details
ParameterValue
Data volume, Gbases13
Data volume, Mbytes7971

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