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Accession: PRJNA285752 ID: 285752

Chromatin-release of the long ncRNA A-ROD is required for transcriptional activation of its target gene DKK1

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA285752; GEO: GSE69507
TypeUmbrella project
PublicationsNtini E et al., "Long ncRNA A-ROD activates its target gene DKK1 at its release from chromatin.", Nat Commun, 2018 Apr 24;9(1):1636
SubmissionRegistration date: 3-Jun-2015
IMBB-FORTH
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments5
Publications
PubMed1
PMC1
Other datasets
BioSample5
GEO DataSets4
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1575
SRA Data Details
ParameterValue
Data volume, Gbases44
Data volume, Mbytes26884
Chromatin-release of the long ncRNA A-ROD is required for transcriptional activation of its target gene DKK1 encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA285755Homo sapiensBisulfite sequencing coupled to target enrichment in MCF-7 (IMBB-FORTH)
Transcriptome or Gene expression2
BioProject
accession
OrganismTitle
PRJNA285756Homo sapiensChromatin-associated RNA-seq in MCF-7 (IMBB-FORTH)
PRJNA432953Homo sapiensTotal nucleoplasmic RNA-seq in MCF-7 (IMBB-FORTH)

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