U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA262053 ID: 262053

freshwater metagenome

Lake Erie transcriptome Transcriptome or Gene expression

The differential gene expression of Microcystis and other cyanobacteria was assessed using whole transcriptome sequencing of microbial populations to assess how different bloom species respond to environmental signals and gain a competitive edge though the simultaneous upregulation of different genes which have strong implications for dominance and bloom severity.
AccessionPRJNA262053
Data TypeTranscriptome or Gene expression
ScopeEnvironment
Organismfreshwater metagenome[Taxonomy ID: 449393]
unclassified sequences; metagenomes; ecological metagenomes; freshwater metagenome
Grants
  • "Establishing the sources of phosphorus promoting toxic cyanobacteria blooms in the US Great Lakes using gene expression assays" (Grant ID NA10NOS4780140, National Oceanic and Atmospheric Adminisration)
SubmissionRegistration date: 25-Sep-2014
Stony Brook University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments24
Other datasets
BioSample24
SRA Data Details
ParameterValue
Data volume, Gbases76
Data volume, Mbytes55864

Supplemental Content

Recent activity

  • freshwater metagenome
    freshwater metagenome
    Lake Erie transcriptome Transcriptome or Gene expression
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center