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Accession: PRJNA187087 ID: 187087

Arabidopsis thaliana (thale cress)

Translational landscape of photomorphogenic Arabidopsis

See Genome Information for Arabidopsis thaliana
We report the application of ribosome profiling method to map ribosome locations on transcripts in de-etiolating Arabidopsis seedlings Overall design: Examine steady-state mRNA and ribosome-protected mRNA abundance in 4-day-old etiolated seedlings with/without 4-h light treatment
AccessionPRJNA187087; GEO: GSE43703
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsLiu MJ et al., "Translational landscape of photomorphogenic Arabidopsis.", Plant Cell, 2013 Oct;25(10):3699-710
SubmissionRegistration date: 23-Jan-2013
Academia sinica
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases45
Data volume, Mbytes28551

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