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Accession: PRJNA178098 ID: 178098

Mus musculus (house mouse)

ChIP-seq analysis of CTCF binding sites in lymphocyte subsets [DN thymocytes]

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This project is a component of the ChIP-seq analysis of CTCF binding sites in lymphocyte subsets
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2 additional projects are components of the ChIP-seq analysis of CTCF binding sites in lymphocyte subsets.
66571 additional projects are related by organism.
In this study, we compare the binding pattern of CTCF at the T cell receptor alpha locus in different subsets of developing lymphocytes. More...
AccessionPRJNA178098; GEO: GSE41739
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsShih HY et al., "Tcra gene recombination is supported by a Tcra enhancer- and CTCF-dependent chromatin hub.", Proc Natl Acad Sci U S A, 2012 Dec 11;109(50):E3493-502
SubmissionRegistration date: 22-Oct-2012
TSRI
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes52
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes453

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    Mus musculus
    ChIP-seq analysis of CTCF binding sites in lymphocyte subsets [DN thymocytes]
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