Lactococcus sp. (ID 1074855) - BioProject

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Accession: PRJNA1074855 ID: 1074855

Lactococcus sp.

Genome sequencing and assembly of Lactococcus spp. isolated from Hong Kong

See Genome Information for Lactococcus

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15 additional projects are related by organism.

76 genomes of Lactococcus formosensis, Lactococcus garvieae and Lactococcus petauri isolated from different sources in Hong Kong.

Accession	PRJNA1074855
Data Type	Genome sequencing
Scope	Multispecies
Organism	Lactococcus sp.[Taxonomy ID: 44273] Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus sp.
Publications	Lee CH et al., "Infectious intracranial aneurysm associated with Lactococcus garvieae: A case report and literature review.", Infect Med (Beijing), 2024 Sep;3(3):100123 Chan Y-X et al., "Genomic investigation of Lactococcus formosensis, Lactococcus garvieae, and Lactococcus petauri reveals differences in species distribution by human and animal sources.", Microbiol Spectr, 2024 Jun 4;12(6):e0054124
Submission	Registration date: 8-Feb-2024 The University of Hong Kong

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	89
WGS master	67
Genomic DNA	22
Protein Sequences	17323
Publications
PubMed	2
PMC	2
Other datasets
BioSample	76
Assembly	76

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

9
67
76

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_044988975.1	JBJFKO000000000		SAMN44614372	Sashimi-1031	Lactococcus formosensis subsp. formosensis
GCA_044988965.1	JBJFKQ000000000		SAMN44614370	Sashimi-1666	Lactococcus formosensis subsp. bovis
GCA_044988885.1	JBJFKM000000000		SAMN44614374	Sashimi-1092	Lactococcus formosensis subsp. formosensis
GCA_044988915.1	JBJFKN000000000		SAMN44614373	Sashimi-1649	Lactococcus formosensis subsp. formosensis
GCA_044988875.1	JBJFKL000000000		SAMN44614375	Sashimi-1661	Lactococcus formosensis subsp. formosensis
GCA_044989025.1	JBJFKP000000000		SAMN44614371	Sashimi-1665	Lactococcus formosensis subsp. bovis
GCA_038380755.1		3	SAMN40028299	L5	Lactococcus formosensis subsp. formosensis
GCA_038381215.1		4	SAMN40028296	L2	Lactococcus garvieae
GCA_038380565.1		2	SAMN40028301	L7	Lactococcus garvieae
GCA_044988845.1	JBJFKH000000000		SAMN44614379	Sashimi-1032	Lactococcus garvieae
GCA_044988825.1	JBJFKJ000000000		SAMN44614377	Fecal-929	Lactococcus garvieae
GCA_044988785.1	JBJFKG000000000		SAMN44614380	Sashimi-1090	Lactococcus garvieae
GCA_044988775.1	JBJFKF000000000		SAMN44614381	Sashimi-1656	Lactococcus garvieae
GCA_044988765.1	JBJFKE000000000		SAMN44614382	Sashimi-1688	Lactococcus garvieae
GCA_044988725.1	JBJFKC000000000		SAMN44614384	Sashimi-1691	Lactococcus garvieae
GCA_044988735.1	JBJFKD000000000		SAMN44614383	Sashimi-1689	Lactococcus garvieae
GCA_044988705.1	JBJFKB000000000		SAMN44614385	Sashimi-1079	Lactococcus garvieae
GCA_044988685.1	JBJFKA000000000		SAMN44614386	Sashimi-1080	Lactococcus garvieae
GCA_044988645.1	JBJFJX000000000		SAMN44614389	Sashimi-1093	Lactococcus garvieae
GCA_044988635.1	JBJFJW000000000		SAMN44614390	Fecal-733	Lactococcus garvieae
GCA_044988625.1	JBJFJZ000000000		SAMN44614387	Sashimi-1038	Lactococcus garvieae
GCA_044988865.1	JBJFKI000000000		SAMN44614378	CutFruit-1737	Lactococcus garvieae
GCA_044988905.1	JBJFKK000000000		SAMN44614376	Fecal-364	Lactococcus garvieae
GCA_044988585.1	JBJFJY000000000		SAMN44614388	Sashimi-1088	Lactococcus garvieae
GCA_044988605.1	JBJFJV000000000		SAMN44614391	Fecal-622	Lactococcus petauri
GCA_044988565.1	JBJFJU000000000		SAMN44614392	Fecal-587	Lactococcus petauri
GCA_044988535.1	JBJFJT000000000		SAMN44614393	Sashimi-1072	Lactococcus petauri
GCA_044988505.1	JBJFJS000000000		SAMN44614394	Fecal-600	Lactococcus petauri
GCA_044988495.1	JBJFJR000000000		SAMN44614395	Fecal-372	Lactococcus petauri
GCA_044988485.1	JBJFJQ000000000		SAMN44614396	Fecal-658	Lactococcus petauri
GCA_044988465.1	JBJFJP000000000		SAMN44614397	Fecal-958	Lactococcus petauri
GCA_044988445.1	JBJFJO000000000		SAMN44614398	Fecal-512	Lactococcus petauri
GCA_044988405.1	JBJFJN000000000		SAMN44614399	SaladVeg-1725	Lactococcus petauri
GCA_044988415.1	JBJFJM000000000		SAMN44614400	SaladVeg-1756	Lactococcus petauri
GCA_044988345.1	JBJFJJ000000000		SAMN44614403	Sashimi-1051	Lactococcus petauri
GCA_044988355.1	JBJFJK000000000		SAMN44614402	Sashimi-1050	Lactococcus petauri
GCA_044988365.1	JBJFJL000000000		SAMN44614401	CutFruit-1771	Lactococcus petauri
GCA_044988315.1	JBJFJI000000000		SAMN44614404	Sashimi-1065	Lactococcus petauri
GCA_044988305.1	JBJFJH000000000		SAMN44614405	Sashimi-1066	Lactococcus petauri
GCA_044988265.1	JBJFJG000000000		SAMN44614406	Sashimi-1077	Lactococcus petauri
GCA_044988275.1	JBJFJF000000000		SAMN44614407	Sashimi-1084	Lactococcus petauri
GCA_044988235.1	JBJFJE000000000		SAMN44614408	Sashimi-1085	Lactococcus petauri
GCA_044988225.1	JBJFJC000000000		SAMN44614410	Sashimi-1096	Lactococcus petauri
GCA_044988205.1	JBJFJD000000000		SAMN44614409	Sashimi-1111	Lactococcus petauri
GCA_044988185.1	JBJFJB000000000		SAMN44614411	Sashimi-1667	Lactococcus petauri
GCA_044988155.1	JBJFJA000000000		SAMN44614412	Sashimi-1721	Lactococcus petauri
GCA_044988145.1	JBJFIZ000000000		SAMN44614413	Fecal-331	Lactococcus petauri
GCA_044988115.1	JBJFIW000000000		SAMN44614416	Fecal-912	Lactococcus petauri
GCA_044988095.1	JBJFIX000000000		SAMN44614415	Fecal-186	Lactococcus petauri
GCA_044988085.1	JBJFIY000000000		SAMN44614414	Fecal-649	Lactococcus petauri
GCA_044988065.1	JBJFIU000000000		SAMN44614418	Fecal-498	Lactococcus petauri
GCA_044988045.1	JBJFIV000000000		SAMN44614417	Fecal-378	Lactococcus petauri
GCA_044988005.1	JBJFIT000000000		SAMN44614419	Fecal-276	Lactococcus petauri
GCA_044987985.1	JBJFIQ000000000		SAMN44614422	Sashimi-1061	Lactococcus petauri
GCA_044987995.1	JBJFIR000000000		SAMN44614421	Fecal-719	Lactococcus petauri
GCA_044987955.1	JBJFIO000000000		SAMN44614424	Sashimi-1118	Lactococcus petauri
GCA_044987945.1	JBJFIS000000000		SAMN44614420	Fecal-320	Lactococcus petauri
GCA_044987925.1	JBJFIP000000000		SAMN44614423	Sashimi-1062	Lactococcus petauri
GCA_044987885.1	JBJFIN000000000		SAMN44614425	Sashimi-1669	Lactococcus petauri
GCA_044987875.1	JBJFIL000000000		SAMN44614427	Sashimi-1033	Lactococcus petauri
GCA_044987835.1	JBJFIK000000000		SAMN44614428	Sashimi-1035	Lactococcus petauri
GCA_044987825.1	JBJFIM000000000		SAMN44614426	Fecal-478	Lactococcus petauri
GCA_044987845.1	JBJFIJ000000000		SAMN44614429	Sashimi-1063	Lactococcus petauri
GCA_044987765.1	JBJFIG000000000		SAMN44614432	Sashimi-1651	Lactococcus petauri
GCA_044987775.1	JBJFII000000000		SAMN44614430	Sashimi-1091	Lactococcus petauri
GCA_044987755.1	JBJFIH000000000		SAMN44614431	Sashimi-1112	Lactococcus petauri
GCA_044987735.1	JBJFIE000000000		SAMN44614435	Sashimi-1049	Lactococcus petauri
GCA_044987725.1	JBJFIF000000000		SAMN44614434	Sashimi-1044	Lactococcus petauri
GCA_044987675.1	JBJFID000000000		SAMN44614436	Sashimi-1046	Lactococcus petauri
GCA_044987665.1	JBJFIC000000000		SAMN44614437	Sashimi-1094	Lactococcus petauri
GCA_038380455.1		1	SAMN40028302	L8	Lactococcus petauri
GCA_038380845.1		1	SAMN40028297	L3	Lactococcus petauri
GCA_038380785.1		3	SAMN40028298	L4	Lactococcus petauri
GCA_038381585.1		5	SAMN40028295	L1	Lactococcus petauri
GCA_038380635.1		2	SAMN40028300	L6	Lactococcus petauri
GCA_045343885.1		1	SAMN44614433	L9	Lactococcus petauri

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Lactococcus sp.

Genome sequencing and assembly of Lactococcus spp. isolated from Hong Kong

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