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Accession: PRJNA1051574 ID: 1051574

Assessment of in-vivo AMR transfer to Salmonella in chickens

This study evaluated the in vivo transfer of tetracycline resistance genes from potential Escherichia coli donor to Salmonella Heidelberg recipients in layer chicks. More...
AccessionPRJNA1051574
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 12-Dec-2023
USDA-ARS
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)36
SRA Experiments36
Other datasets
BioSample36
Assembly36
Assembly details:
Assembly levelNumber of Assemblies
36
36
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_038419975.1ContigJBCAQR000000000SAMN38788359
N1_013
GCA_038419935.1ContigJBCAQQ000000000SAMN38788370
N2_073
GCA_038419925.1ContigJBCAQP000000000SAMN38788377
N3_126
GCA_037891765.1ContigJBBLVP000000000SAMN38788348
N2_066
GCA_037891745.1ContigJBBLVO000000000SAMN38788349
N2_074
GCA_037891725.1ContigJBBLVN000000000SAMN38788350
N2_076
GCA_037891705.1ContigJBBLVK000000000SAMN38788353
N2_065
GCA_037891665.1ContigJBBLVI000000000SAMN38788355
N1_023
GCA_037891645.1ContigJBBLVM000000000SAMN38788351
N2_071
GCA_037891615.1ContigJBBLVJ000000000SAMN38788354
N1_018
GCA_037891585.1ContigJBBLVL000000000SAMN38788352
N3_122
GCA_037891545.1ContigJBBLVF000000000SAMN38788358
N1_024
GCA_037891525.1ContigJBBLVH000000000SAMN38788356
N3_121
GCA_037891505.1ContigJBBLVD000000000SAMN38788361
N1_020
GCA_037891485.1ContigJBBLVE000000000SAMN38788360
N2_070
GCA_037891465.1ContigJBBLVG000000000SAMN38788357
N3_128
GCA_037891445.1ContigJBBLVC000000000SAMN38788362
N1_022
GCA_037891425.1ContigJBBLVB000000000SAMN38788363
N3_118
GCA_037891405.1ContigJBBLUZ000000000SAMN38788365
N2_075
GCA_037891385.1ContigJBBLVA000000000SAMN38788364
N2_069
GCA_037891365.1ContigJBBLUY000000000SAMN38788366
N2_068
GCA_037891345.1ContigJBBLUV000000000SAMN38788369
N3_123
GCA_037891315.1ContigJBBLUT000000000SAMN38788372
N3_125
GCA_037891295.1ContigJBBLUU000000000SAMN38788371
N1_017
GCA_037891275.1ContigJBBLUW000000000SAMN38788368
N2_072
GCA_037891255.1ContigJBBLUX000000000SAMN38788367
N1_016
GCA_037891235.1ContigJBBLUO000000000SAMN38788378
N3_117
GCA_037891215.1ContigJBBLUR000000000SAMN38788374
N1_014
GCA_037891195.1ContigJBBLUS000000000SAMN38788373
N3_119
GCA_037891175.1ContigJBBLUP000000000SAMN38788376
N3_127
GCA_037891155.1ContigJBBLUQ000000000SAMN38788375
N1_019
GCA_037891135.1ContigJBBLUN000000000SAMN38788379
N3_124
GCA_037891115.1ContigJBBLUL000000000SAMN38788381
N1_021
GCA_037891095.1ContigJBBLUM000000000SAMN38788380
N2_067
GCA_037891075.1ContigJBBLUJ000000000SAMN38788383
N3_120
GCA_037891055.1ContigJBBLUK000000000SAMN38788382
N1_015
SRA Data Details
ParameterValue
Data volume, Gbases40
Data volume, Mbytes34954

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