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Accession: PRJEB34042 ID: 660995

Respiratory metagenomic sequencing in the RESCEU project

Targeted metagenomic sequencing of nasopharyngeal swabs from participants with respiratory syncytial virus infection in the REspiratory Syncytial virus Consortium in EUrope (RESCEU) project.

Strand-specific libraries with target enrichment using a predesigned probe set were constructed from nasopharyngeal swabs collected in the clinical studies of the REspiratory Syncytial virus Consortium in EUrope (RESCEU) project, which is a European multicentre study investigating the epidemiological, virological, and immunological features of respiratory syncytial virus (RSV) infection. More...
AccessionPRJEB34042
Data TypeGenome sequencing
ScopeMonoisolate
PublicationsLin GL et al., "Simultaneous Viral Whole-Genome Sequencing and Differential Expression Profiling in Respiratory Syncytial Virus Infection of Infants.", J Infect Dis, 2020 Oct 7;222(Suppl 7):S666-S671
SubmissionRegistration date: 2-Sep-2020
University of Oxford, Oxford, England, UK
Locus Tag PrefixRESCEU
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic RNA)568
SRA Experiments869
Protein Sequences6542
Publications
PubMed1
SRA Data Details
ParameterValue
Data volume, Gbases523
Data volume, Tbytes0.19

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  • Respiratory metagenomic sequencing in the RESCEU project
    Respiratory metagenomic sequencing in the RESCEU project
    Targeted metagenomic sequencing of nasopharyngeal swabs from participants with respiratory syncytial virus infection in the REspiratory Syncytial virus Consortium in EUrope (RESCEU) project.
    BioProject

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