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Accession: PRJEB2670 ID: 204370

Discovery_of_sequence_diversity_in_Streptococcus_suis__Vietnam_

For further information on this study please see http://www.sanger.ac.uk/resources/downloads/bacteria/streptococcus-suis. More...
AccessionPRJEB2670
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 21-May-2013
SC
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4970
WGS master190
SRA Experiments204
Protein Sequences371574
Other datasets
BioSample204
Assembly190
Assembly details:
Assembly levelNumber of Assemblies
8
182
190
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_900051985.1ContigFIOW00000000SAMEA1566106
EN370
GCA_900060675.1ContigFIPP00000000SAMEA1566027
SS23
GCA_900064035.1ContigFIOM00000000SAMEA1566194
EN191
GCA_900058515.1ScaffoldFIQS00000000SAMEA1566017
SS82
GCA_900060335.1ContigFIOE00000000SAMEA1566097
EN031
GCA_900058075.1ContigFITF00000000SAMEA1566138
FX483_3
GCA_900061045.1ContigFIOH00000000SAMEA1566116
EN020
GCA_900053605.1ContigFINK00000000SAMEA1566104
BM366a
GCA_900065415.1ContigFIMW00000000SAMEA1566089
BM264a
GCA_900061435.1ContigFITL00000000SAMEA1566077
FX540_1
GCA_900054315.1ContigFIPQ00000000SAMEA1566186
SS24
GCA_900049355.1ContigFIML00000000SAMEA1566150
BM216a
GCA_900057065.1ContigFINF00000000SAMEA1566039
BM346B
GCA_900053215.1ContigFIPY00000000SAMEA1566109
SS31
GCA_900057535.1ScaffoldFITC00000000SAMEA1566126
FX428_1
GCA_900057695.1ContigFIQB00000000SAMEA1566016
SS38
GCA_900055895.1ContigFIRS00000000SAMEA1566034
VS3709
GCA_900054125.1ScaffoldFIND00000000SAMEA1566155
BM334B
GCA_900050055.1ContigFISP00000000SAMEA1566191
FX109
GCA_900054305.1ContigFIPD00000000SAMEA1566142
EN633
GCA_900058755.1ContigFIOJ00000000SAMEA1566054
EN068
GCA_900055905.1ContigFITB00000000SAMEA1566190
FX415_6
GCA_900063665.1ContigFIQA00000000SAMEA1566107
SS35
GCA_900058745.1ContigFIOI00000000SAMEA1566062
EN0114
GCA_900049665.1ContigFISL00000000SAMEA1566130
FX50_2
GCA_900060345.1ContigFIOD00000000SAMEA1566020
EN050
GCA_900063285.1ContigFIOG00000000SAMEA1566030
EN044
GCA_900058305.1ContigFIQI00000000SAMEA1566197
SS65
GCA_900055535.1ContigFIRW00000000SAMEA1566168
VS3878
GCA_900060145.1ContigFIQV00000000SAMEA1566122
SS85
GCA_900052245.1ContigFIOX00000000SAMEA1566031
EN326
GCA_900050905.1ContigFISY00000000SAMEA1566198
FX328_4
GCA_900059465.1ContigFIMQ00000000SAMEA1566093
BM231a
GCA_900061065.1ContigFIOF00000000SAMEA1566082
EN024
GCA_900057075.1ContigFIOA00000000SAMEA1566135
EN010
GCA_900063625.1ContigFINM00000000SAMEA1566094
BM418a
GCA_900063295.1ContigFIQQ00000000SAMEA1566045
SS78
GCA_900056595.1ContigFIQU00000000SAMEA1566083
SS84
GCA_900063655.1ContigFIPX00000000SAMEA1566121
SS32
GCA_900056615.1ContigFISD00000000SAMEA1566088
CTU02SS-DN026
GCA_900049685.1ContigFISX00000000SAMEA1566156
FX275
GCA_900064695.1ContigFIQR00000000SAMEA1566037
SS79
GCA_900054115.1ContigFIMX00000000SAMEA1566110
BM278a
GCA_900058065.1ContigFIRV00000000SAMEA1566185
VS3865
GCA_900061015.1ContigFINN00000000SAMEA1566087
BM411a
GCA_900060965.1ContigFIME00000000SAMEA1566026
BM178a
GCA_900058055.1ContigFIOU00000000SAMEA1566043
EN281
GCA_900054355.1ContigFIRU00000000SAMEA1566207
VS3861
GCA_900049135.1ContigFINA00000000SAMEA1566123
BM303a
GCA_900049125.1ContigFIMS00000000SAMEA1566125
BM228C
GCA_900056865.1ContigFIPC00000000SAMEA1566131
EN515
GCA_900051285.1ContigFIQW00000000SAMEA1566127
SS87
GCA_900065825.1ContigFISV00000000SAMEA1566033
FX211
GCA_900060135.1ContigFIPM00000000SAMEA1566153
SS20
GCA_900063635.1ContigFINP00000000SAMEA1566074
BM436a
GCA_900061425.1ScaffoldFISB00000000SAMEA1566085
01ZN-TG187
GCA_900059515.1ScaffoldFIPK00000000SAMEA1566193
SS16
GCA_900065065.1ContigFIMG00000000SAMEA1566189
BM197a
GCA_900060995.1ContigFIMK00000000SAMEA1566174
BM209a
GCA_900061035.1ContigFINS00000000SAMEA1566040
BM444a
GCA_900065795.1ContigFION00000000SAMEA1566164
EN171
GCA_900064705.1ContigFISJ00000000SAMEA1566161
FX28_2
GCA_900059925.1ContigFIPB00000000SAMEA1566129
EN508
GCA_900052005.1ContigFIRQ00000000SAMEA1566050
VS3699
GCA_900054595.1ContigFIRH00000000SAMEA1566056
VS3466
GCA_900051975.1ContigFIOT00000000SAMEA1566014
EN330
GCA_900061415.1ContigFISC00000000SAMEA1566141
01ZN-TG183
GCA_900059525.1ContigFIPT00000000SAMEA1566178
SS27
GCA_900060155.1ContigFIRY00000000SAMEA1566115
VS3881
GCA_900054865.1ContigFINY00000000SAMEA1566144
EN003
GCA_900058525.1ContigFIRX00000000SAMEA1566128
VS3886
GCA_900058275.1ContigFINC00000000SAMEA1566175
BM329B
GCA_900050455.1ContigFIOQ00000000SAMEA1566173
EN264
GCA_900056625.1ScaffoldFITD00000000SAMEA1566118
FX431
GCA_900053195.1ContigFINX00000000SAMEA1566165
BM471
GCA_900049145.1ContigFINB00000000SAMEA1566192
BM315C
GCA_900054345.1ContigFIRT00000000SAMEA1566022
VS3804
GCA_900052865.1ContigFIQT00000000SAMEA1566076
SS83
GCA_900054605.1ContigFISG00000000SAMEA1566169
FX18
GCA_900059185.1ContigFINT00000000SAMEA1566024
BM461
GCA_900059495.1ContigFINI00000000SAMEA1566021
BM358a
GCA_900053805.1ContigFISZ00000000SAMEA1566205
FX336_2
GCA_900052855.1ContigFIQC00000000SAMEA1566052
SS40
GCA_900059545.1ContigFIQN00000000SAMEA1566160
SS74
GCA_900055885.1ContigFIRO00000000SAMEA1566067
VS3587
GCA_900055155.1ContigFIRN00000000SAMEA1566080
VS3575
GCA_900057685.1ContigFIQD00000000SAMEA1566038
SS37
GCA_900061025.1ContigFINO00000000SAMEA1566108
BM424a
GCA_900055875.1ContigFINZ00000000SAMEA1566157
BM478
GCA_900054335.1ContigFIRC00000000SAMEA1566172
SS102
GCA_900051995.1ContigFIRD00000000SAMEA1566015
VS2979
GCA_900063015.1ContigFISF00000000SAMEA1566100
CTU02SS-DN025
GCA_900056585.1ContigFIPR00000000SAMEA1566199
SS25
GCA_900050015.1ContigFIMU00000000SAMEA1566063
BM237a
GCA_900060975.1ContigFIMH00000000SAMEA1566203
BM191a
GCA_900050045.1ContigFIRI00000000SAMEA1566065
VS3513
GCA_900064305.1ContigFISK00000000SAMEA1566151
FX40_1
GCA_900061005.1ContigFINL00000000SAMEA1566081
BM373a
GCA_900053625.1ContigFIPI00000000SAMEA1566013
SS14
GCA_900049175.1ContigFISN00000000SAMEA1566048
FX90_2
GCA_900050035.1ContigFINQ00000000SAMEA1566079
BM441a
GCA_900059175.1ContigFINJ00000000SAMEA1566023
BM362a
GCA_900058785.1ContigFISQ00000000SAMEA1566120
FX51_2
GCA_900049155.1ContigFIQX00000000SAMEA1566148
SS99
GCA_900053795.1ContigFIMZ00000000SAMEA1566187
BM321C
GCA_900057525.1ContigFIQG00000000SAMEA1566162
SS46
GCA_900065095.1ContigFITQ00000000SAMEA1566176
SS19
GCA_900049995.1ContigFIMI00000000SAMEA1566209
BM198a
GCA_900058325.1ContigFITK00000000SAMEA1566073
FX535_2
GCA_900055515.1ContigFIRM00000000SAMEA1566095
VS3569
GCA_900050885.1ContigFIQF00000000SAMEA1566041
SS44
GCA_900057725.1ContigFITI00000000SAMEA1566105
FX527_2
GCA_900052845.1ContigFIQE00000000SAMEA1566096
SS36
GCA_900065805.1ContigFIOP00000000SAMEA1566208
EN251
GCA_900060985.1ContigFIMJ00000000SAMEA1566152
BM203a
GCA_900054855.1ContigFINR00000000SAMEA1566055
BM452C
GCA_900059485.1ContigFIMV00000000SAMEA1566098
BM257a
GCA_900056885.1ContigFIQO00000000SAMEA1566058
SS76
GCA_900059905.1ContigFINH00000000SAMEA1566029
BM357B
GCA_900058775.1ContigFIRG00000000SAMEA1566057
VS3309
GCA_900057505.1ContigFINE00000000SAMEA1566051
BM345B
GCA_900050005.1ContigFIMT00000000SAMEA1566046
BM241a
GCA_900049185.1ContigFISU00000000SAMEA1566018
FX184_2
GCA_900065265.1ContigFISS00000000SAMEA1566114
FX73_1
GCA_900051965.1ContigFIOL00000000SAMEA1566177
EN170
GCA_900058285.1ContigFIPS00000000SAMEA1566163
SS26
GCA_900062105.1ContigFISI00000000SAMEA1566201
FX14
GCA_900054325.1ContigFIQZ00000000SAMEA1566159
VS2903
GCA_900059205.1ContigFIQM00000000SAMEA1566181
SS73
GCA_900058315.1ContigFITE00000000SAMEA1566147
FX478
GCA_900055145.1ContigFIRL00000000SAMEA1566103
VS3543
GCA_900057705.1ContigFIQK00000000SAMEA1566196
SS69
GCA_900065055.1ContigFIMF00000000SAMEA1566202
BM190a
GCA_900053615.1ContigFIPE00000000SAMEA1566154
EN636
GCA_900055525.1ContigFIRP00000000SAMEA1566059
VS3640
GCA_900056605.1ContigFISE00000000SAMEA1566075
01ZN-TG189
GCA_900061395.1ContigFIOK00000000SAMEA1566049
EN124
GCA_900059915.1ContigFINU00000000SAMEA1566019
BM460
GCA_900059505.1ContigFIPH00000000SAMEA1566036
SS13
GCA_900055135.1ContigFIRJ00000000SAMEA1566078
VS3517
GCA_900049675.1ContigFISM00000000SAMEA1566111
FX59_4
GCA_900065245.1ContigFIQP00000000SAMEA1566028
SS81
GCA_900050865.1ContigFIOR00000000SAMEA1566167
EN253
GCA_900059785.1ContigFINV00000000SAMEA1566195
BM465
GCA_900049655.1ContigFIMN00000000SAMEA1566143
BM213a
GCA_900058295.1ContigFIQJ00000000SAMEA1566158
SS47
GCA_900061055.1ContigFIOC00000000SAMEA1566069
EN023
GCA_900049365.1ContigFISR00000000SAMEA1566102
FX74
GCA_900059535.1ScaffoldFIQL00000000SAMEA1566184
SS66
GCA_900050895.1ContigFIRR00000000SAMEA1566032
VS3756
GCA_900061075.1ContigFISA00000000SAMEA1566140
VS3888
GCA_900065425.1ContigFIOO00000000SAMEA1566204
EN177
GCA_900050445.1ContigFIMO00000000SAMEA1566112
BM224C
GCA_900065815.1ContigFIPV00000000SAMEA1566149
SS29
GCA_900054365.1ContigFITA00000000SAMEA1566188
FX419
GCA_900062305.1ContigFITJ00000000SAMEA1566044
FX543_1
GCA_900050025.1ContigFIMY00000000SAMEA1566113
BM272C
GCA_900059475.1ContigFIMR00000000SAMEA1566084
BM251C
GCA_900053235.1ContigFITH00000000SAMEA1566090
FX507_1
GCA_900065255.1ContigFIQY00000000SAMEA1566119
SS97
GCA_900055505.1ContigFIRF00000000SAMEA1566047
VS329
GCA_900059215.1ContigFITG00000000SAMEA1566136
FX501
GCA_900052835.1ContigFIOY00000000SAMEA1566091
EN399
GCA_900050065.1ContigFIST00000000SAMEA1566053
FX147_3
GCA_900058765.1ContigFIPN00000000SAMEA1566145
SS21
GCA_900063645.1ContigFIPF00000000SAMEA1566166
EN652
GCA_900058045.1ContigFIOS00000000SAMEA1566060
EN271
GCA_900054875.1ContigFIRE00000000SAMEA1566035
VS3121
GCA_900062115.1ContigFISH00000000SAMEA1566180
FX22
GCA_900053185.1ContigFINW00000000SAMEA1566183
BM466
GCA_900065275.1ContigFISO00000000SAMEA1566086
FX77_1
GCA_900064685.1ContigFIPW00000000SAMEA1566146
SS30
GCA_900059195.1ContigFIPJ00000000SAMEA1566206
SS15
GCA_900057515.1ContigFIOZ00000000SAMEA1566117
EN507
GCA_900057715.1ContigFIRK00000000SAMEA1566092
VS3537
GCA_900053635.1ContigFIPZ00000000SAMEA1566099
SS33
GCA_900060125.1ScaffoldFIOB00000000SAMEA1566124
EN015
GCA_900053225.1ContigFIRA00000000SAMEA1566134
SS101
GCA_900056575.1ContigFIPA00000000SAMEA1566101
EN506
GCA_900049165.1ContigFIRB00000000SAMEA1566200
VS2923
GCA_900050875.1ContigFIOV00000000SAMEA1566042
EN314
GCA_900053205.1ContigFIPU00000000SAMEA1566137
SS28
GCA_900065075.1ContigFISW00000000SAMEA1566170
FX230
GCA_900049115.1ContigFIMM00000000SAMEA1566132
BM211a
GCA_900061405.1ContigFIRZ00000000SAMEA1566071
01ZN-ST222
GCA_900058505.1ContigFIPG00000000SAMEA1566182
EN660
GCA_900060665.1ContigFIPO00000000SAMEA1566139
SS22
GCA_900060355.1ContigFIPL00000000SAMEA1566179
SS17
GCA_900065405.1ContigFIMP00000000SAMEA1566064
BM253a
GCA_900056875.1ContigFIQH00000000SAMEA1566171
SS61
SRA Data Details
ParameterValue
Data volume, Gbases73
Data volume, Mbytes32764

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