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Accession: PRJDA67425 ID: 67425

Acropora digitifera strain:Oku, Okinawa, Japan

Acropora digitifera Genome sequencing project

See Genome Information for Acropora digitifera
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26 additional projects are related by organism.
Coral sperm from one individual (colony). The first decoded coral genome.
AccessionPRJDA67425
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismAcropora digitifera[Taxonomy ID: 70779]
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora; Acropora digitifera
Publications
  • Shinzato C et al., "Genome-wide SNP analysis explains coral diversity and recovery in the Ryukyu Archipelago.", Sci Rep, 2015 Dec 10;5:18211
  • Shinzato C et al., "Using the Acropora digitifera genome to understand coral responses to environmental change.", Nature, 2011 Jul 24;476(7360):320-3
SubmissionRegistration date: 1-Aug-2011
Okinawa Institute of Science and Technology
Locus Tag PrefixGMA
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2421
WGS master1
SRA Experiments14
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000222465.2ScaffoldBACK00000000SAMD00004206
Acropora digitifera
SRA Data Details
ParameterValue
Data volume, Gbases77
Data volume, Mbytes76918
Related RefSeq Project
PRJNA314803 : Acropora digitifera strain:Oku, Okinawa, Japan RefSeq Genome

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