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Organizing biological data

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The following terms were not found in BioProject: eggc.vip, -eggc.vip-fFu.

Select item 10797641.

The efficacy of LCMV-based cancer vaccines is unleashed by intratumoral injections of polyI:C (II)

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

FIMA

Accession:: PRJNA1079764
ID:: 1079764

Select item 10285092.

The efficacy of LCMV-based cancer vaccines is unleashed by intratumoral injections of polyI:C

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

FIMA

Accession:: PRJNA1028509
ID:: 1028509

Select item 9454523.

Brain transcriptomics reveal the activation of neuroinflammation pathways during acute Orientia tsutsugamushi infection in C57BL/6 mice

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Soong Laboratory, Microbiology and Immunology, University of Texas Medical Branch

Accession:: PRJNA945452
ID:: 945452

Select item 9119744.

Fungal microbiota composition in IBD

: Project data type: Raw sequence reads

Scope:: Multispecies

Clinical-Academic Group - Precision medicine in IBD

Accession:: PRJNA911974
ID:: 911974

Select item 9082035.

RNA-seq of cytoplasmic and nucleoplasmic samples of a time-course of Ad5-infected A549 cells

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB57806
ID:: 908203

Select item 8212176.

MRSA temporal adaptation to the healthy and influenza injured lung microenvironment

Taxonomy:: Staphylococcus aureus

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Eric Schmidt, Pulmonary Sciences and Critical Care, University of Colorado Denver, Anschutz

Accession:: PRJNA821217
ID:: 821217

Select item 6495047.

scRNAseq of exhausted CD8 T cells harvested from different tissues

This study focuses on the trancriptional landcape of exhausted vrus-specific transgenic (P14) CD8 T cells three weeks into chronic LCMV infection.

: Project data type: Other

Scope:: Monoisolate

ETH Zurich,

Accession:: PRJEB36998
ID:: 649504

Select item 5799888.

Influenza A virus-infection differentially affects conventional and regulatory T cell repertoire

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

AG Prinz, Institut für Immunologie, Medizinische Hochschule Hannover

Accession:: PRJNA579988
ID:: 579988

Select item 5594679.

Robust hepatitis E virus infection and transcriptional response in human hepatocytes

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Molecular & Medical Virology, Ruhr University Bochum

Accession:: PRJNA559467
ID:: 559467

Select item 54508610.

Effect of the noncoding RNA produced by ZIKA virus (ZIKV) on expression of Aedes aegypti genes

Organism:: Aedes aegypti

Taxonomy:: Aedes aegypti (yellow fever mosquito)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

RNA Virology Lab, School of Chemistry and Molecular Biosciences, The University Of Queensland

Accession:: PRJNA545086
ID:: 545086

Select item 39950411.

Aedes aegypti

Global transcriptome analysis of Aedes aegypti mosquitoes in response to Zika virus infection

Taxonomy:: Aedes aegypti (yellow fever mosquito)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Insect host-pathogen Interaction, School of Biological Sciences, The University of Queensland

Accession:: PRJNA399504
ID:: 399504

Select item 38216212.

Aedes aegypti

Zika virus alters the microRNA expression profile and elicits an RNAi response in Aedes aegpyti mosquitoes

Taxonomy:: Aedes aegypti (yellow fever mosquito)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Pathology, University of Texas Medical Branch

Accession:: PRJNA382162
ID:: 382162

Select item 31430313.

Mus musculus

Mouse popliteal lymph node transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [microRNA]

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

PNNL

Accession:: PRJNA314303
ID:: 314303

Select item 31430214.

Mus musculus

Mouse popliteal lymph node transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [mRNA]

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

PNNL

Accession:: PRJNA314302
ID:: 314302

Select item 30968315.

Mus musculus

Mouse cerebellum transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [WCB001_mRNA]

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

PNNL

Accession:: PRJNA309683
ID:: 309683

Select item 30968216.

Mus musculus

Mouse cortex transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [WCT001_mRNA]

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

PNNL

Accession:: PRJNA309682
ID:: 309682

Select item 30968117.

Mus musculus

Mouse cerebellum transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [WCB001_microRNA]

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

PNNL

Accession:: PRJNA309681
ID:: 309681

Select item 30968018.

Mus musculus

Mouse cortex transcriptome response to a wild type West Nile virus (WNV), New York 99 Strain, and mutant WNV-E218A viruses [WCT001_miRNA]

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

PNNL

Accession:: PRJNA309680
ID:: 309680

Select item 29890919.

Mus musculus

Influenza H3N2 infection of the Collaborative Cross founder strains reveals highly divergent host responses and identifies a unique phenotype in CAST/EiJ mice (blood)

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Genome Analytics, Dep. Molecular Bacteriology, HCI - Helmholtz Centre for Infection Research

Accession:: PRJNA298909
ID:: 298909

Select item 29890820.

Mus musculus

Influenza H3N2 infection of the Collaborative Cross founder strains reveals highly divergent host responses and identifies a unique phenotype in CAST/EiJ mice (lung)