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Organizing biological data
DECISION
The DECISION project aims to discover more personalized combinatorial therapies for patients with decompensation of cirrhosis. This will be achieved by using readily available clinical data, prospectively collected in a homogenous manner from large clinical studies, with the corresponding standardized biobank samples that will produce omics data once they are fully analyzed.
ColLomic Genome Assemblies
City-wide metagenomic surveillance of food centres reveals location-specific microbial signatures and enrichment of antibiotic resistance genes
Fusarium oxysporum f. sp. vasinfectum; Berkeleyomyces rouxiae
Soil-borne pathogens of cotton. Raw sequence reads
Staphylococcus aureus experimental evolution in C. elegans
Assessment of upper respiratory and gut bacterial microbiomes during COVID-19 infection in adults potential aerodigestive transmission
Pseudomonas aeruginosa strain:NOT APPLICABLE | isolate:ID003 | breed:NOT APPLICABLE | cultivar:NOT APPLICABLE
Pseudomonas aeruginosa strain:NOT APPLICABLE | isolate:ID003 | breed:NOT APPLICABLE | cultivar:NOT APPLICABLE Genome sequencing and assembly
Salmonella enterica subsp. enterica serovar Infantis
Monitoring the persistence and distribution of Salmonella enterica genomic types in the Central California Coast agricultural region
Effects of soil types on microbial networks and biogeochemical cycles in Yalu river wetland
Two-target_drive
Improving the suppressive power of homing gene drive by co-targeting a distant-site female fertility gene
BIODEP
Transcriptomic profiles in major depressive disorder patients with different levels of inflammation
Madurella fahalii strain:IFM 68171
Genome sequence of Madurella fahalii IFM 68171
Transcriptomes from larval and early postlarval stages of the demosponge Amphimedon queenslandica
ATAC-seq data from larval and early postlarval stages of the demosponge Amphimedon queenslandica
Integrator complex subunit 12 knockout overcomes a transcriptional block to HIV latency reversal [AutoCUT&Tag]
Clarifying the phylogenetic placement of the Eupoinae Maddison, 2015 with ultra-conserved element data (Araneae, Salticidae)
Hybridisation between Podarcis siculus and Podarcis raffonei
Spatial transcriptomics revealed that S1pr2 deletion in keratinocytes increases the MyD88/NF-kB pathway and psoriasis-related cytokine expression in the epidermis
NEIL DNA glycosylase deficient HAP1 cells
Enhanced glutathione levels confer resistance to apoptotic and ferroptotic programmed cell death in NEIL DNA glycosylase deficient HAP1 cells
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