ID 823741 - BioProject

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Accession: PRJNA823741 ID: 823741

Molecular characterization of multi-drug resistant (MDR) Gram-negative pathogens from hospital environments, patients and staff in a teaching hospital in Ghana

This study seeks to characterize MDR Gram-negative bacterial isolates, antibiotic and biocide resistance genes, virulence genes and their associated mobile genetic elements from hospital environments, patients and staff in a teaching hospital in Ghana.

Accession	PRJNA823741
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 5-Apr-2022 University of KwaZulu Natal
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	46
Other datasets
BioSample	51
Assembly	46

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

46
46

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_022968685.1	JALJVB000000000	SAMN27356705	P116A	Acinetobacter baumannii
GCA_022967985.1	JALJVC000000000	SAMN27356706	P134B	Acinetobacter lwoffii
GCA_022967955.1	JALJVF000000000	SAMN27356709	E48	Citrobacter freundii
GCA_022968175.1	JALJVD000000000	SAMN27356707	P151	Enterobacter cloacae
GCA_022968675.1	JALJVA000000000	SAMN27356704	P52	Enterobacter hormaechei
GCA_022968335.1	JALJUA000000000	SAMN27356672	P17	Escherichia coli
GCA_022968235.1	JALJTZ000000000	SAMN27356671	P142	Escherichia coli
GCA_022968215.1	JALJUB000000000	SAMN27356673	E50-1	Escherichia coli
GCA_022968115.1	JALJTS000000000	SAMN27356663	E37	Escherichia coli
GCA_022968075.1	JALJTR000000000	SAMN27356662	P51B	Escherichia coli
GCA_022968055.1	JALJTT000000000	SAMN27356664	E29	Escherichia coli
GCA_022968855.1	JALJUM000000000	SAMN27356685	P63	Escherichia coli
GCA_022968635.1	JALJTX000000000	SAMN27356668	P49	Escherichia coli
GCA_022968615.1	JALJTW000000000	SAMN27356667	P2R	Escherichia coli
GCA_022968595.1	JALJTY000000000	SAMN27356669	P73	Escherichia coli
GCA_022968575.1	JALJUD000000000	SAMN27356675	E55-2	Escherichia coli
GCA_022968555.1	JALJUF000000000	SAMN27356677	P105	Escherichia coli
GCA_022968525.1	JALJUG000000000	SAMN27356678	P159	Escherichia coli
GCA_022968515.1	JALJUE000000000	SAMN27356676	P165	Escherichia coli
GCA_022968495.1	JALJUH000000000	SAMN27356679	P166	Escherichia coli
GCA_022968465.1	JALJUJ000000000	SAMN27356681	E56	Escherichia coli
GCA_022968455.1	JALJUI000000000	SAMN27356680	P128	Escherichia coli
GCA_022968425.1	JALJUK000000000	SAMN27356683	P115	Escherichia coli
GCA_022968415.1	JALJUC000000000	SAMN27356674	P60R	Escherichia coli
GCA_022967965.1	JALJTV000000000	SAMN27356666	E53	Escherichia coli
GCA_022968355.1	JALJUL000000000	SAMN27356684	P143	Escherichia coli
GCA_022967975.1	JALJTU000000000	SAMN27356665	E25B	Escherichia coli
GCA_025630975.1	JAOTPN000000000	SAMN31146634	P72	Escherichia coli
GCA_025630715.1	JAOTPM000000000	SAMN31146635	P141	Escherichia coli
GCA_025660355.1	JAOURD000000000	SAMN27356682	P5	Escherichia coli
GCA_025660335.1	JAOURF000000000	SAMN27356710	S7	Escherichia coli
GCA_022968005.1	JALJUZ000000000	SAMN27356702	E55-1	Klebsiella pneumoniae
GCA_022968085.1	JALJUX000000000	SAMN27356700	P129	Klebsiella pneumoniae
GCA_022968155.1	JALJUW000000000	SAMN27356699	E50-2	Klebsiella pneumoniae
GCA_022968315.1	JALJUQ000000000	SAMN27356690	P60-1	Klebsiella pneumoniae
GCA_022968285.1	JALJUT000000000	SAMN27356693	P144	Klebsiella pneumoniae
GCA_022968275.1	JALJUR000000000	SAMN27356691	P121	Klebsiella pneumoniae
GCA_022968255.1	JALJUS000000000	SAMN27356692	P136	Klebsiella pneumoniae
GCA_022968745.1	JALJUU000000000	SAMN27356697	P109	Klebsiella pneumoniae
GCA_022968735.1	JALJUN000000000	SAMN27356686	E4	Klebsiella pneumoniae
GCA_022968715.1	JALJUO000000000	SAMN27356687	E34A	Klebsiella pneumoniae
GCA_022968365.1	JALJUP000000000	SAMN27356688	E35	Klebsiella pneumoniae
GCA_025660315.1	JAOURE000000000	SAMN27356694	P157	Klebsiella pneumoniae
GCA_022968195.1	JALJUV000000000	SAMN27356698	P113	Klebsiella quasipneumoniae
GCA_022968775.1	JALJUY000000000	SAMN27356701	P150	Klebsiella variicola
GCA_022968655.1	JALJVE000000000	SAMN27356708	E30	Proteus mirabilis

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Molecular characterization of multi-drug resistant (MDR) Gram-negative pathogens from hospital environments, patients and staff in a teaching hospital in Ghana

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