U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA480251 ID: 480251

Streptococcus

Genomic characterization of diverse oral streptococci

A selection of low-passage clinical oral streptococci isolates were whole-genome shotgun sequenced for genotype-phenotype association studies
AccessionPRJNA480251
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismStreptococcus[Taxonomy ID: 1301]
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
Grants
  • "Probiotics that moderate pH and antagonize pathogens to promote oral health" (Grant ID R01DE25832, National Institute of Dental and Craniofacial Research)
SubmissionRegistration date: 12-Dec-2018
Clemson University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)7445
WGS master113
SRA Experiments114
Protein Sequences227923
Other datasets
BioSample114
Assembly113
Assembly details:
Assembly levelNumber of Assemblies
113
113
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003943625.1ContigRQOY00000000SAMN09631676
A13
GCA_003943615.1ContigRJPZ00000000SAMN09631677
G1
GCA_003943535.1ContigRJPU00000000SAMN09631682
BCC13
GCA_003943515.1ContigRJPT00000000SAMN09631683
BCC41
GCA_003943505.1ContigRJPS00000000SAMN09631684
A52
GCA_003943455.1ContigRJPL00000000SAMN09631691
BCA15
GCA_003943465.1ContigRJPR00000000SAMN09631685
A53
GCA_003943435.1ContigRJPP00000000SAMN09631687
A55
GCA_003944315.1ContigRJPQ00000000SAMN09631686
A54
GCA_003944305.1ContigRJPO00000000SAMN09631688
A56
GCA_003944245.1ContigRJPM00000000SAMN09631690
BCA6
GCA_003944225.1ContigRJPN00000000SAMN09631689
BCA4
GCA_003943815.1ContigRJNA00000000SAMN09631764
BCC51
GCA_003944115.1ContigRJPD00000000SAMN09631703
BCC62
GCA_003944105.1ContigRJPB00000000SAMN09631705
A10
GCA_003944075.1ContigRJOT00000000SAMN09631714
BCA14
GCA_003944065.1ContigRJOS00000000SAMN09631715
BCA22
GCA_003944155.1ContigRJPE00000000SAMN09631702
BCC57
GCA_003944135.1ContigRJPF00000000SAMN09631700
BCC29
GCA_003943345.1ContigRJVY00000000SAMN09631698
BCC09
GCA_003943355.1ContigRJPG00000000SAMN09631699
BCC27
GCA_003943305.1ContigRJVX00000000SAMN09631701
BCC32
GCA_003943295.1ContigRJPC00000000SAMN09631704
KLC06
GCA_003943285.1ContigRJPA00000000SAMN09631706
A11
GCA_003943245.1ContigRJOY00000000SAMN09631708
A7
GCA_003943255.1ContigRJOZ00000000SAMN09631707
A9
GCA_003943215.1ContigRJOX00000000SAMN09631709
A8
GCA_003943195.1ContigRJOW00000000SAMN09631711
BCA7
GCA_003943175.1ContigRJOU00000000SAMN09631713
BCA10
GCA_003943155.1ContigRJOR00000000SAMN09631716
BCC01
GCA_003943145.1ContigRJOP00000000SAMN09631718
BCC47
GCA_003943125.1ContigRJOO00000000SAMN09631719
KLC02
GCA_003943095.1ContigRJOM00000000SAMN09631721
A2
GCA_003943085.1ContigRJOL00000000SAMN09631722
A3
GCA_003943045.1ContigRJOJ00000000SAMN09631724
A5
GCA_003943035.1ContigRJOI00000000SAMN09631725
A6
GCA_003944025.1ContigRJOQ00000000SAMN09631717
BCC34
GCA_003944015.1ContigRJON00000000SAMN09631720
KLC09
GCA_003944005.1ContigRJOK00000000SAMN09631723
A4
GCA_003943965.1ContigRJOA00000000SAMN09631735
BCC49
GCA_003943955.1ContigRJOF00000000SAMN09631730
BCC33
GCA_003943935.1ContigRJOB00000000SAMN09631734
BCC45
GCA_003943905.1ContigRJNS00000000SAMN09631746
BCA11
GCA_003943915.1ContigRJNT00000000SAMN09631745
KLC12
GCA_003942995.1ContigRJOH00000000SAMN09631728
BCC06
GCA_003942965.1ContigRJOG00000000SAMN09631729
BCC07
GCA_003942945.1ContigRJOE00000000SAMN09631731
BCC36
GCA_003942915.1ContigRJOD00000000SAMN09631732
BCC40
GCA_003942885.1ContigRJOC00000000SAMN09631733
BCC44
GCA_003944325.1ContigRJPX00000000SAMN09631679
BCC17
GCA_003943575.1ContigRJPW00000000SAMN09631680
BCC22
GCA_003943555.1ContigRJPV00000000SAMN09631681
BCC30
GCA_003943605.1ContigRJPY00000000SAMN09631678
BCC08
GCA_003942865.1ContigRJNZ00000000SAMN09631737
BCC55
GCA_003942575.1ContigRJNH00000000SAMN09631757
BCC15
GCA_003942765.1ContigRJNW00000000SAMN09631741
KLC01
GCA_003942775.1ContigRJNX00000000SAMN09631740
BCC65
GCA_003942715.1ContigRJNV00000000SAMN09631743
KLC07
GCA_003942685.1ContigRJNR00000000SAMN09631747
BCA12
GCA_003942695.1ContigRJNU00000000SAMN09631744
KLC11
GCA_003942795.1ContigRJNY00000000SAMN09631739
BCC60
GCA_003942665.1ContigRJNQ00000000SAMN09631748
BCA16
GCA_003942635.1ContigRJNM00000000SAMN09631752
BCC50
GCA_003942805.1ContigRMVJ00000000SAMN09631738
BCC58
GCA_003942675.1ContigRJNN00000000SAMN09631751
BCC38
GCA_003942585.1ContigRJNK00000000SAMN09631754
BCC59
GCA_003942565.1ContigRJNI00000000SAMN09631756
BCA21
GCA_003942785.1ContigRMVI00000000SAMN09631742
KLC05
GCA_003942285.1ContigRJME00000000SAMN09631786
BCA18
GCA_003943395.1ContigRJPJ00000000SAMN09631694
BCC12
GCA_003943415.1ContigRJPK00000000SAMN09631693
BCC10
GCA_003943385.1ContigRJPI00000000SAMN09631695
BCC26
GCA_003942875.1ContigRMVK00000000SAMN09631736
BCC52
GCA_003942985.1ContigRMVL00000000SAMN09631727
BCC02
GCA_003943005.1ContigRMVM00000000SAMN09631726
BCA19
GCA_003943875.1ContigRJNP00000000SAMN09631749
BCC11
GCA_003943825.1ContigRJNJ00000000SAMN09631755
BCC63
GCA_003943835.1ContigRJNO00000000SAMN09631750
BCC19
GCA_003943805.1ContigRJNE00000000SAMN09631760
BCC35
GCA_003944205.1ContigRJPH00000000SAMN09631697
BCA2
GCA_003944215.1ContigRJVZ00000000SAMN09631696
BCA1
GCA_003944235.1ContigRMVN00000000SAMN09631692
BCC05
GCA_003944395.1ContigRJMF00000000SAMN09631785
BCA17
GCA_003942525.1ContigRJNG00000000SAMN09631758
A1
GCA_003942515.1ContigRJNF00000000SAMN09631759
BCC42
GCA_003942275.1ContigRJMN00000000SAMN09631777
BCC28
GCA_003942265.1ContigRJMP00000000SAMN09631775
BCC24
GCA_003942485.1ContigRJND00000000SAMN09631761
BCC37
GCA_003942465.1ContigRJNC00000000SAMN09631762
BCC39
GCA_003942475.1ContigRJNB00000000SAMN09631763
BCC46
GCA_003942405.1ContigRJMY00000000SAMN09631766
BCC61
GCA_003942415.1ContigRJMX00000000SAMN09631767
BCC64
GCA_003942375.1ContigRJMS00000000SAMN09631772
BCC18
GCA_003942385.1ContigRJMT00000000SAMN09631771
BCC16
GCA_003942365.1ContigRJMR00000000SAMN09631773
BCC20
GCA_003942305.1ContigRJMJ00000000SAMN09631781
KLC08
GCA_003942295.1ContigRJMO00000000SAMN09631776
BCC25
GCA_003942595.1ContigRJNL00000000SAMN09631753
BCC53
GCA_003944405.1ContigRJMG00000000SAMN09631784
BCA13
GCA_003944485.1ContigRJMI00000000SAMN09631782
KLC10
GCA_003944475.1ContigRJML00000000SAMN09631779
KLC03
GCA_003944465.1ContigRJMK00000000SAMN09631780
KLC04
GCA_003944415.1ContigRJMH00000000SAMN09631783
BCA3
GCA_003943785.1ContigRJMZ00000000SAMN09631765
BCC54
GCA_003943755.1ContigRJMW00000000SAMN09631768
BCC03
GCA_003943735.1ContigRJMV00000000SAMN09631769
BCC04
GCA_003943715.1ContigRJMQ00000000SAMN09631774
BCC23
GCA_003943705.1ContigRJMU00000000SAMN09631770
BCC14
GCA_003943655.1ContigRJMM00000000SAMN09631778
BCC31
GCA_003944125.1ContigRJOV00000000SAMN09631712
BCA9
GCA_003943675.1ContigRJQB00000000SAMN09631674
G2
GCA_003944345.1ContigRJQA00000000SAMN09631675
BCC21
GCA_003944385.1ContigRJMD00000000SAMN09631787
BCA20
SRA Data Details
ParameterValue
Data volume, Gbases21
Data volume, Mbytes12089

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center