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Accession: PRJNA434545 ID: 434545

soda lake metagenome

Metagenomes hypersaline soda lake sediments

We analyzed five metagenomes of prokaryote communities that inhabit the top sediments of hypersaline soda lakes in the Kulunda Steppe (South-Western Siberia, Russian Federation). More...
AccessionPRJNA434545
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsoda lake metagenome[Taxonomy ID: 1627878]
unclassified sequences; metagenomes; ecological metagenomes; soda lake metagenome
SubmissionRegistration date: 13-Sep-2018
Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)871
Other datasets
BioSample876
Assembly871
Assembly details:
Assembly levelNumber of Assemblies
871
871
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_003568075.1ContigPWXW00000000SAMN08574827
T3Sed10_110R1
GCA_003567835.1ContigPWYO00000000SAMN08574845
T3Sed10_139
GCA_003565495.1ContigPXBX00000000SAMN08574932
T3Sed10_265
GCA_003564035.1ContigPWSH00000000SAMN08574681
CSSed11_136
GCA_003563375.1ContigPWSB00000000SAMN08574675
CSSed11_114R1
GCA_003562565.1ContigPWUL00000000SAMN08574737
CSSed11_237
GCA_003553045.1ContigPUPJ00000000SAMN08575167
B1Sed10_105
GCA_003567435.1ContigPWZN00000000SAMN08574870
T3Sed10_173
GCA_003563055.1ContigPWSY00000000SAMN08574698
CSSed11_170R1
GCA_003563035.1ContigPWTA00000000SAMN08574700
CSSed11_171R2
GCA_003564075.1ContigPWSC00000000SAMN08574676
CSSed11_117R1
GCA_003563925.1ContigPWSZ00000000SAMN08574699
CSSed11_171R1
GCA_003562415.1ContigPWUY00000000SAMN08574750
CSSed11_260
GCA_003562365.1ContigPWVB00000000SAMN08574753
CSSed11_269R1
GCA_003562275.1ContigPWVJ00000000SAMN08574761
CSSed11_292R1
GCA_003566235.1ContigPXED00000000SAMN08574990
T3Sed10_365
GCA_003563815.1ContigPWTR00000000SAMN08574717
CSSed11_199
GCA_003558335.1ContigPWMA00000000SAMN08574517
CSSed10_256R1
GCA_003562215.1ContigPWVV00000000SAMN08574773
CSSed11_318R1
GCA_003560495.1ContigPWLM00000000SAMN08574503
CSSed10_241R1
GCA_003568285.1ContigPWYN00000000SAMN08574844
T3Sed10_138
GCA_003568205.1ContigPWZE00000000SAMN08574861
T3Sed10_162
GCA_003568055.1ContigPWYA00000000SAMN08574831
T3Sed10_118
GCA_003567405.1ContigPWZO00000000SAMN08574871
T3Sed10_174
GCA_003567455.1ContigPWZM00000000SAMN08574869
T3Sed10_172R1
GCA_003567205.1ContigPXAA00000000SAMN08574883
T3Sed10_192R1
GCA_003567625.1ContigPWZB00000000SAMN08574858
T3Sed10_157R1
GCA_003566175.1ContigPXEO00000000SAMN08575001
T3Sed10_46
GCA_003566095.1ContigPXEZ00000000SAMN08575012
T3Sed10_63R1
GCA_003565855.1ContigPXAN00000000SAMN08574896
T3Sed10_21
GCA_003565735.1ContigPXBB00000000SAMN08574910
T3Sed10_232R1
GCA_003566735.1ContigPXCC00000000SAMN08574937
T3Sed10_27
GCA_003566495.1ContigPXDD00000000SAMN08574964
T3Sed10_32
GCA_003565455.1ContigPXCA00000000SAMN08574935
T3Sed10_269R1
GCA_003565415.1ContigPXCB00000000SAMN08574936
T3Sed10_269R2
GCA_003564715.1ContigPXEN00000000SAMN08575000
T3Sed10_44
GCA_003564675.1ContigPXER00000000SAMN08575004
T3Sed10_51
GCA_003564255.1ContigPXFN00000000SAMN08575026
T3Sed10_88R1
GCA_003555385.1ContigPWHO00000000SAMN08575067
T1Sed10_123
GCA_003555045.1ContigPWHT00000000SAMN08575062
T1Sed10_114
GCA_003554665.1ContigPWGY00000000SAMN08575083
T1Sed10_144
GCA_003554165.1ContigPWFR00000000SAMN08575116
T1Sed10_27
GCA_003554065.1ContigPWFJ00000000SAMN08575124
T1Sed10_40
GCA_003553005.1ContigPUPG00000000SAMN08575170
B1Sed10_108R1
GCA_003553765.1ContigPWFF00000000SAMN08575128
T1Sed10_53
GCA_003553405.1ContigPWEH00000000SAMN08575152
T1Sed10_86
GCA_003558215.1ContigPWML00000000SAMN08574528
CSSed10_272
GCA_003558045.1ContigPWMV00000000SAMN08574538
CSSed10_28R1
GCA_003557965.1ContigPWND00000000SAMN08574546
CSSed10_302R1
GCA_003557945.1ContigPWNF00000000SAMN08574548
CSSed10_302R3
GCA_003557805.1ContigPWNY00000000SAMN08574567
CSSed10_347
GCA_003557765.1ContigPWNO00000000SAMN08574557
CSSed10_321R1
GCA_003557725.1ContigPWNQ00000000SAMN08574559
CSSed10_331
GCA_003557385.1ContigPWON00000000SAMN08574582
CSSed10_38
GCA_003557285.1ContigPWPA00000000SAMN08574595
CSSed10_40
GCA_003556325.1ContigPWRF00000000SAMN08574652
CSSed10_80
GCA_003560305.1ContigPWIT00000000SAMN08574432
CSSed10_119
GCA_003560215.1ContigPWIY00000000SAMN08574437
CSSed10_126
GCA_003560165.1ContigPWJC00000000SAMN08574441
CSSed10_131
GCA_003560135.1ContigPWJG00000000SAMN08574445
CSSed10_138
GCA_003561315.1ContigPWWZ00000000SAMN08574803
CSSed11_71
GCA_003560835.1ContigPWJX00000000SAMN08574462
CSSed10_17
GCA_003560815.1ContigPWKC00000000SAMN08574467
CSSed10_175
GCA_003560775.1ContigPWKE00000000SAMN08574469
CSSed10_177
GCA_003559855.1ContigPWJZ00000000SAMN08574464
CSSed10_172R1
GCA_003559735.1ContigPWKN00000000SAMN08574478
CSSed10_193
GCA_003559615.1ContigPWKW00000000SAMN08574487
CSSed10_207
GCA_003559475.1ContigPWLF00000000SAMN08574496
CSSed10_229R1
GCA_003559015.1ContigPWNE00000000SAMN08574547
CSSed10_302R2
GCA_003561575.1ContigPWWG00000000SAMN08574784
CSSed11_44
GCA_003563735.1ContigPWUD00000000SAMN08574729
CSSed11_21R2
GCA_003563955.1ContigPWSX00000000SAMN08574697
CSSed11_161
GCA_003562935.1ContigPWTG00000000SAMN08574706
CSSed11_178
GCA_003552245.1ContigPUOU00000000SAMN08575182
B1Sed10_126
GCA_003552205.1ContigPUKB00000000SAMN08575305
B1Sed10_96
GCA_003552075.1ContigPUOJ00000000SAMN08575193
B1Sed10_143R1
GCA_003551825.1ContigPUNS00000000SAMN08575210
B1Sed10_175
GCA_003551345.1ContigPUML00000000SAMN08575243
B1Sed10_228
GCA_003551185.1ContigPUMB00000000SAMN08575253
B1Sed10_259
GCA_003550825.1ContigPULE00000000SAMN08575276
B1Sed10_55
GCA_003550725.1ContigPUKZ00000000SAMN08575281
B1Sed10_61
GCA_003568385.1ContigPWXX00000000SAMN08574828
T3Sed10_114R1
GCA_003564495.1ContigPXFE00000000SAMN08575017
T3Sed10_75
GCA_003565275.1ContigPXCR00000000SAMN08574952
T3Sed10_30
GCA_003566695.1ContigPXCG00000000SAMN08574941
T3Sed10_280
GCA_003567115.1ContigPXAP00000000SAMN08574898
T3Sed10_212R1
GCA_003563525.1ContigPWVC00000000SAMN08574754
CSSed11_274R1
GCA_003561995.1ContigPWXA00000000SAMN08574804
CSSed11_73
GCA_003559695.1ContigPWKP00000000SAMN08574480
CSSed10_198R1
GCA_003560655.1ContigPWKQ00000000SAMN08574481
CSSed10_198R2
GCA_003561015.1ContigPWIS00000000SAMN08574431
CSSed10_117R1
GCA_003556565.1ContigPWRE00000000SAMN08574651
CSSed10_77
GCA_003556985.1ContigPWPZ00000000SAMN08574620
CSSed10_456R1
GCA_003556895.1ContigPWQD00000000SAMN08574624
CSSed10_468R1
GCA_003556745.1ContigPWQM00000000SAMN08574633
CSSed10_492R2
GCA_003557255.1ContigPWPE00000000SAMN08574599
CSSed10_406
GCA_003557775.1ContigPWNN00000000SAMN08574556
CSSed10_319R1
GCA_003554865.1ContigPWHJ00000000SAMN08575072
T1Sed10_131
GCA_003551495.1ContigPUMT00000000SAMN08575235
B1Sed10_220R1
GCA_003552405.1ContigPULW00000000SAMN08575258
B1Sed10_32
GCA_003555185.1ContigPWFZ00000000SAMN08575108
T1Sed10_211R1
GCA_003553865.1ContigPWFK00000000SAMN08575123
T1Sed10_4m
GCA_003557045.1ContigPWPU00000000SAMN08574615
CSSed10_44
GCA_003556665.1ContigPWQR00000000SAMN08574638
CSSed10_51
GCA_003556205.1ContigPWRO00000000SAMN08574661
CSSed10_90
GCA_003560435.1ContigPWIN00000000SAMN08574426
CSSed10_111R1
GCA_003559375.1ContigPWLN00000000SAMN08574504
CSSed10_244R1
GCA_003558475.1ContigPWQV00000000SAMN08574642
CSSed10_55R1
GCA_003561515.1ContigPWWL00000000SAMN08574789
CSSed11_50
GCA_003561455.1ContigPWWO00000000SAMN08574792
CSSed11_54R1
GCA_003562665.1ContigPWUA00000000SAMN08574726
CSSed11_218R1
GCA_003564615.1ContigPXET00000000SAMN08575006
T3Sed10_55
GCA_003564595.1ContigPXEV00000000SAMN08575008
T3Sed10_57m
GCA_003564745.1ContigPXEM00000000SAMN08574999
T3Sed10_41
GCA_003568095.1ContigPWXU00000000SAMN08574825
T3Sed10_108R1
GCA_003568255.1ContigPWYX00000000SAMN08574854
T3Sed10_153R1
GCA_003567795.1ContigPWYQ00000000SAMN08574847
T3Sed10_141
GCA_003567135.1ContigPXAI00000000SAMN08574891
T3Sed10_203R1
GCA_003567355.1ContigPWZR00000000SAMN08574874
T3Sed10_18
GCA_003564535.1ContigPXFC00000000SAMN08575015
T3Sed10_69R1
GCA_003565595.1ContigPXBI00000000SAMN08574917
T3Sed10_243R1
GCA_003566825.1ContigPXBS00000000SAMN08574927
T3Sed10_26m
GCA_003566635.1ContigPXCK00000000SAMN08574945
T3Sed10_283R2
GCA_003566645.1ContigPXCJ00000000SAMN08574944
T3Sed10_283R1
GCA_003566395.1ContigPXDL00000000SAMN08574972
T3Sed10_333R1
GCA_003562425.1ContigPWUX00000000SAMN08574749
CSSed11_25R1
GCA_003558975.1ContigPWNU00000000SAMN08574563
CSSed10_343
GCA_003559045.1ContigPWMX00000000SAMN08574540
CSSed10_294
GCA_003558865.1ContigPWOR00000000SAMN08574586
CSSed10_387R1
GCA_003559715.1ContigPWKO00000000SAMN08574479
CSSed10_196R1
GCA_003560335.1ContigPWIR00000000SAMN08574430
CSSed10_116
GCA_003559925.1ContigPWJT00000000SAMN08574458
CSSed10_166R1
GCA_003561195.1ContigPWXF00000000SAMN08574809
CSSed11_81R1
GCA_003561355.1ContigPWWW00000000SAMN08574800
CSSed11_69
GCA_003560895.1ContigPWJO00000000SAMN08574453
CSSed10_156R1
GCA_003556685.1ContigPWQQ00000000SAMN08574637
CSSed10_508
GCA_003557245.1ContigPWPG00000000SAMN08574601
CSSed10_409R1
GCA_003558355.1ContigPWLX00000000SAMN08574514
CSSed10_253
GCA_003553465.1ContigPWEI00000000SAMN08575151
T1Sed10_85
GCA_003555145.1ContigPWID00000000SAMN08575052
T1Sed10_100
GCA_003554975.1ContigPWHQ00000000SAMN08575065
T1Sed10_12
GCA_003554765.1ContigPWHF00000000SAMN08575076
T1Sed10_135
GCA_003550465.1ContigPUKH00000000SAMN08575299
B1Sed10_88
GCA_003566035.1ContigPWZZ00000000SAMN08574882
T3Sed10_190
GCA_003565935.1ContigPXAJ00000000SAMN08574892
T3Sed10_204
GCA_003559575.1ContigPWKZ00000000SAMN08574490
CSSed10_215
GCA_003562835.1ContigPWTN00000000SAMN08574713
CSSed11_191
GCA_003566815.1ContigPXBT00000000SAMN08574928
T3Sed10_260
GCA_003559155.1ContigPWMK00000000SAMN08574527
CSSed10_271
GCA_003552425.1ContigPUMC00000000SAMN08575252
B1Sed10_245
GCA_003551325.1ContigPUMK00000000SAMN08575244
B1Sed10_229R1
GCA_003562845.1ContigPWTL00000000SAMN08574711
CSSed11_183R1m
GCA_003563005.1ContigPWTC00000000SAMN08574702
CSSed11_173R1
GCA_003563495.1ContigPWVG00000000SAMN08574758
CSSed11_285R1
GCA_003553125.1ContigPUPL00000000SAMN08575165
B1Sed10_101
GCA_003566155.1ContigPXEP00000000SAMN08575002
T3Sed10_47
GCA_003567155.1ContigPXAG00000000SAMN08574889
T3Sed10_200m
GCA_003553585.1ContigPWEQ00000000SAMN08575143
T1Sed10_75
GCA_003553905.1ContigPWEA00000000SAMN08575159
T1Sed10_94
GCA_003554845.1ContigPWHK00000000SAMN08575071
T1Sed10_130
GCA_003554045.1ContigPWEY00000000SAMN08575135
T1Sed10_66
GCA_003554235.1ContigPWFY00000000SAMN08575109
T1Sed10_213
GCA_003555465.1ContigPWIB00000000SAMN08575054
T1Sed10_105
GCA_003550625.1ContigPUKU00000000SAMN08575286
B1Sed10_69
GCA_003561145.1ContigPWXL00000000SAMN08574815
CSSed11_91
GCA_003558815.1ContigPWOU00000000SAMN08574589
CSSed10_392
GCA_003558595.1ContigPWPW00000000SAMN08574617
CSSed10_442
GCA_003557395.1ContigPWOM00000000SAMN08574581
CSSed10_379
GCA_003567495.1ContigPWZK00000000SAMN08574867
T3Sed10_170
GCA_003551305.1ContigPUMJ00000000SAMN08575245
B1Sed10_231
GCA_003551385.1ContigPUMN00000000SAMN08575241
B1Sed10_226
GCA_003551785.1ContigPUNP00000000SAMN08575213
B1Sed10_183
GCA_003551565.1ContigPUMZ00000000SAMN08575229
B1Sed10_209R1
GCA_003552145.1ContigPUOP00000000SAMN08575187
B1Sed10_131
GCA_003566265.1ContigPXEA00000000SAMN08574987
T3Sed10_360R1
GCA_003564855.1ContigPXDZ00000000SAMN08574986
T3Sed10_357R1m
GCA_003564155.1ContigPWOA00000000SAMN08574569
CSSed10_348R3
GCA_003564135.1ContigPWNZ00000000SAMN08574568
CSSed10_348R2
GCA_003551125.1ContigPULY00000000SAMN08575256
B1Sed10_29
GCA_003559395.1ContigPWLL00000000SAMN08574502
CSSed10_239
GCA_003558235.1ContigPWMI00000000SAMN08574525
CSSed10_269
GCA_003556695.1ContigPWQP00000000SAMN08574636
CSSed10_505
GCA_003553825.1ContigPWFL00000000SAMN08575122
T1Sed10_39R1
GCA_003554185.1ContigPWFU00000000SAMN08575113
T1Sed10_24
GCA_003557835.1ContigPWNL00000000SAMN08574554
CSSed10_312R1
GCA_003560355.1ContigPWIP00000000SAMN08574428
CSSed10_113R1
GCA_003560255.1ContigPWIX00000000SAMN08574436
CSSed10_125
GCA_003554785.1ContigPWHG00000000SAMN08575075
T1Sed10_134
GCA_003551285.1ContigPUMH00000000SAMN08575247
B1Sed10_237
GCA_003559655.1ContigPWKT00000000SAMN08574484
CSSed10_203R1
GCA_003562965.1ContigPWTD00000000SAMN08574703
CSSed11_174
GCA_003567195.1ContigPXAB00000000SAMN08574884
T3Sed10_195R1
GCA_003565405.1ContigPXCD00000000SAMN08574938
T3Sed10_270
GCA_003559175.1ContigPWMJ00000000SAMN08574526
CSSed10_270
GCA_003552765.1ContigPUOI00000000SAMN08575194
B1Sed10_145
GCA_003557825.1ContigPWNM00000000SAMN08574555
CSSed10_315
GCA_003557915.1ContigPWNG00000000SAMN08574549
CSSed10_305
GCA_003552485.1ContigPUMX00000000SAMN08575231
B1Sed10_210R1
GCA_003556945.1ContigPWQA00000000SAMN08574621
CSSed10_457
GCA_003561715.1ContigPWVU00000000SAMN08574772
CSSed11_315
GCA_003564805.1ContigPXEH00000000SAMN08574994
T3Sed10_370
GCA_003566535.1ContigPXCZ00000000SAMN08574960
T3Sed10_311
GCA_003554305.1ContigPWFV00000000SAMN08575112
T1Sed10_231
GCA_003554445.1ContigPWGJ00000000SAMN08575098
T1Sed10_186
GCA_003554365.1ContigPWGC00000000SAMN08575105
T1Sed10_200
GCA_003554795.1ContigPWHH00000000SAMN08575074
T1Sed10_133
GCA_003554915.1ContigPWHM00000000SAMN08575069
T1Sed10_127
GCA_003554905.1ContigPWHP00000000SAMN08575066
T1Sed10_122R1
GCA_003555075.1ContigPWHW00000000SAMN08575059
T1Sed10_111R1
GCA_003552945.1ContigPUPE00000000SAMN08575172
B1Sed10_112
GCA_003553285.1ContigPWDZ00000000SAMN08575160
T1Sed10_95R1
GCA_003553025.1ContigPUPI00000000SAMN08575168
B1Sed10_106R1
GCA_003553505.1ContigPWEN00000000SAMN08575146
T1Sed10_78
GCA_003556925.1ContigPWQC00000000SAMN08574623
CSSed10_466R1
GCA_003556825.1ContigPWQH00000000SAMN08574628
CSSed10_475R1
GCA_003556525.1ContigPWRH00000000SAMN08574654
CSSed10_83
GCA_003558315.1ContigPWMB00000000SAMN08574518
CSSed10_257
GCA_003557065.1ContigPWPS00000000SAMN08574613
CSSed10_436R1
GCA_003557325.1ContigPWOY00000000SAMN08574593
CSSed10_399
GCA_003557645.1ContigPWNV00000000SAMN08574564
CSSed10_344R1
GCA_003557585.1ContigPWOE00000000SAMN08574573
CSSed10_355
GCA_003561655.1ContigPWWB00000000SAMN08574779
CSSed11_339R1
GCA_003562595.1ContigPWUJ00000000SAMN08574735
CSSed11_232
GCA_003563095.1ContigPWSV00000000SAMN08574695
CSSed11_159
GCA_003559335.1ContigPWLP00000000SAMN08574506
CSSed10_246R1
GCA_003559315.1ContigPWLS00000000SAMN08574509
CSSed10_248R1
GCA_003559635.1ContigPWKU00000000SAMN08574485
CSSed10_205R1
GCA_003558455.1ContigPWLQ00000000SAMN08574507
CSSed10_246R2
GCA_003559065.1ContigPWMZ00000000SAMN08574542
CSSed10_297R1
GCA_003560095.1ContigPWJI00000000SAMN08574447
CSSed10_142
GCA_003561025.1ContigPWII00000000SAMN08574421
CSSed10_104
GCA_003561035.1ContigPWIH00000000SAMN08574420
CSSed10_103
GCA_003560605.1ContigPWKV00000000SAMN08574486
CSSed10_205R2
GCA_003560665.1ContigPWKK00000000SAMN08574475
CSSed10_186
GCA_003560725.1ContigPWKI00000000SAMN08574473
CSSed10_183
GCA_003567375.1ContigPWZQ00000000SAMN08574873
T3Sed10_179
GCA_003567755.1ContigPWYT00000000SAMN08574850
T3Sed10_147R1
GCA_003568135.1ContigPWXS00000000SAMN08574823
T3Sed10_102R1
GCA_003566555.1ContigPXCW00000000SAMN08574957
T3Sed10_306R1
GCA_003565255.1ContigPXCS00000000SAMN08574953
T3Sed10_300
GCA_003565065.1ContigPXDK00000000SAMN08574971
T3Sed10_332R1
GCA_003552105.1ContigPUOL00000000SAMN08575191
B1Sed10_140
GCA_003551435.1ContigPUMQ00000000SAMN08575238
B1Sed10_223R1
GCA_003551425.1ContigPUMP00000000SAMN08575239
B1Sed10_223R2
GCA_003551845.1ContigPUNQ00000000SAMN08575212
B1Sed10_182
GCA_003550975.1ContigPULN00000000SAMN08575267
B1Sed10_45R1
GCA_003566315.1ContigPXDS00000000SAMN08574979
T3Sed10_347R1
GCA_003565945.1ContigPXAH00000000SAMN08574890
T3Sed10_202R1
GCA_003558915.1ContigPWOP00000000SAMN08574584
CSSed10_381R1
GCA_003558655.1ContigPWPO00000000SAMN08574609
CSSed10_423
GCA_003562455.1ContigPWUV00000000SAMN08574747
CSSed11_257m
GCA_003564875.1ContigPXEB00000000SAMN08574988
T3Sed10_361R1
GCA_003554465.1ContigPWGL00000000SAMN08575096
T1Sed10_179m
GCA_003557155.1ContigPWPM00000000SAMN08574607
CSSed10_416R3
GCA_003563585.1ContigPWUQ00000000SAMN08574742
CSSed11_243R1
GCA_003557025.1ContigPWPV00000000SAMN08574616
CSSed10_440
GCA_003557185.1ContigPWPK00000000SAMN08574605
CSSed10_416R1
GCA_003566255.1ContigPXEC00000000SAMN08574989
T3Sed10_362m
GCA_003566755.1ContigPXBZ00000000SAMN08574934
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