Campylobacter concisus (ID 395841) - BioProject

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Accession: PRJNA395841 ID: 395841

Campylobacter concisus

Campylobacter concisus strains from inflammatory bowel disease

See Genome Information for Campylobacter concisus

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24 additional projects are related by organism.

Molecular epidemiology and comparative genomics and typing of Campylobacter concisus strains from saliva, faeces and gut mucosal biopsies in inflammatory bowel disease

Accession	PRJNA395841
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Campylobacter concisus[Taxonomy ID: 199] Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter concisus
Publications	Kirk KF et al., "Molecular epidemiology and comparative genomics of Campylobacter concisus strains from saliva, faeces and gut mucosal biopsies in inflammatory bowel disease.", Sci Rep, 2018 Jan 30;8(1):1902
Submission	Registration date: 2-Feb-2018 University of Bath
Related Resources	Sheppard Lab MRC CLIMB Milner Genomics Centre
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	12512
WGS master	104
Publications
PubMed	1
PMC	1
Other datasets
BioSample	104
Assembly	104

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

104
104

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002914355.1	PPCD00000000	SAMN08200386	AAUH-12CDdes3	Campylobacter concisus
GCA_002914345.1	PPBZ00000000	SAMN08200390	AAUH-10UCf2	Campylobacter concisus
GCA_002914325.1	PPBX00000000	SAMN08200392	AAUH-16UCdp5	Campylobacter concisus
GCA_002914295.1	PPBV00000000	SAMN08200394	AAUH-37UCf	Campylobacter concisus
GCA_002914285.1	PPBN00000000	SAMN08200402	AAUH-4UCti-a	Campylobacter concisus
GCA_002914265.1	PPBL00000000	SAMN08200404	AAUH-7UCil	Campylobacter concisus
GCA_002914245.1	PPBG00000000	SAMN08200409	AAUH-39CDf	Campylobacter concisus
GCA_002914225.1	PPBE00000000	SAMN08200411	AAUH-35UCil4-a	Campylobacter concisus
GCA_002912335.1	POYL00000000	SAMN08200483	AAUH-49UCf	Campylobacter concisus
GCA_002914365.1	PPCF00000000	SAMN08200384	AAUH-16UCf2	Campylobacter concisus
GCA_002912465.1	POYS00000000	SAMN08200475	AAUH-20HCrec-a	Campylobacter concisus
GCA_002912425.1	POYR00000000	SAMN08200477	AAUH-20HCsig-a	Campylobacter concisus
GCA_002912385.1	POYM00000000	SAMN08200482	AAUH-3HCce2	Campylobacter concisus
GCA_002912395.1	POYP00000000	SAMN08200479	AAUH-3HCo	Campylobacter concisus
GCA_002912365.1	POYN00000000	SAMN08200481	AAUH-49UCil-a	Campylobacter concisus
GCA_002912325.1	POYK00000000	SAMN08200484	AAUH-1Dce-a	Campylobacter concisus
GCA_002912785.1	POZP00000000	SAMN08200452	AAUH-51UCf	Campylobacter concisus
GCA_002912735.1	POZN00000000	SAMN08200454	AAUH-10HCdes3	Campylobacter concisus
GCA_002912745.1	POZO00000000	SAMN08200453	AAUH-10HCdes5	Campylobacter concisus
GCA_002912705.1	POZM00000000	SAMN08200455	AAUH-10HCdes	Campylobacter concisus
GCA_002912715.1	POZH00000000	SAMN08200460	AAUH-11HCo-a	Campylobacter concisus
GCA_002912665.1	POZI00000000	SAMN08200459	AAUH-59UCpp-a	Campylobacter concisus
GCA_002912675.1	POZJ00000000	SAMN08200458	AAUH-47UCil-a	Campylobacter concisus
GCA_002912605.1	POZA00000000	SAMN08200467	AAUH-48UCil-a	Campylobacter concisus
GCA_002912615.1	POZG00000000	SAMN08200461	AAUH-10HCce	Campylobacter concisus
GCA_002912585.1	POZD00000000	SAMN08200464	AAUH-10HCtra	Campylobacter concisus
GCA_002912595.1	POZC00000000	SAMN08200465	AAUH-47UCil	Campylobacter concisus
GCA_002912565.1	POYZ00000000	SAMN08200468	AAUH-10HCdes6	Campylobacter concisus
GCA_002912505.1	POYW00000000	SAMN08200471	AAUH-2HCtra	Campylobacter concisus
GCA_002912515.1	POYU00000000	SAMN08200473	AAUH-58UCo	Campylobacter concisus
GCA_002912525.1	POYY00000000	SAMN08200469	AAUH-9HCce	Campylobacter concisus
GCA_002912485.1	POYT00000000	SAMN08200474	AAUH-44UCsig6	Campylobacter concisus
GCA_002914195.1	PPAU00000000	SAMN08200421	AAUH-11UCo	Campylobacter concisus
GCA_002914185.1	PPBC00000000	SAMN08200413	AAUH-39CDti-a	Campylobacter concisus
GCA_002914165.1	PPAR00000000	SAMN08200424	AAUH-16UCf	Campylobacter concisus
GCA_002914145.1	PPAN00000000	SAMN08200428	AAUH-16UCf3	Campylobacter concisus
GCA_002914115.1	PPAM00000000	SAMN08200429	AAUH-12CDce	Campylobacter concisus
GCA_002914105.1	PPAL00000000	SAMN08200430	AAUH-12CDdes4	Campylobacter concisus
GCA_002914065.1	PPAI00000000	SAMN08200433	AAUH-12CDtra2-a	Campylobacter concisus
GCA_002914085.1	PPAJ00000000	SAMN08200432	AAUH-9UCdp	Campylobacter concisus
GCA_002914045.1	PPAG00000000	SAMN08200435	AAUH-25Df	Campylobacter concisus
GCA_002914025.1	PPAA00000000	SAMN08200441	AAUH-9HCasc	Campylobacter concisus
GCA_002914005.1	POZU00000000	SAMN08200447	AAUH-48UCo-a	Campylobacter concisus
GCA_002913965.1	POZL00000000	SAMN08200456	AAUH-11HCf	Campylobacter concisus
GCA_002913985.1	POZQ00000000	SAMN08200451	AAUH-1Dtra	Campylobacter concisus
GCA_002913945.1	POZK00000000	SAMN08200457	AAUH-2012179281	Campylobacter concisus
GCA_002913885.1	POZB00000000	SAMN08200466	AAUH-12HCf	Campylobacter concisus
GCA_002913895.1	POZE00000000	SAMN08200463	AAUH-48UCdp-a	Campylobacter concisus
GCA_002913905.1	POZF00000000	SAMN08200462	AAUH-15HCti	Campylobacter concisus
GCA_002913865.1	POYX00000000	SAMN08200470	AAUH-19HCf2	Campylobacter concisus
GCA_002913825.1	POYQ00000000	SAMN08200478	AAUH-20HCasc	Campylobacter concisus
GCA_002913835.1	POYV00000000	SAMN08200472	AAUH-19HCf	Campylobacter concisus
GCA_002913805.1	POYO00000000	SAMN08200480	AAUH-49UCpp-a	Campylobacter concisus
GCA_002913785.1	PPCI00000000	SAMN08200381	AAUH-22UCpp-a	Campylobacter concisus
GCA_002913765.1	PPCH00000000	SAMN08200382	AAUH-10UCil-a	Campylobacter concisus
GCA_002913745.1	PPCG00000000	SAMN08200383	AAUH-20UCf	Campylobacter concisus
GCA_002913705.1	PPCC00000000	SAMN08200387	AAUH-40UCf	Campylobacter concisus
GCA_002913715.1	PPCE00000000	SAMN08200385	AAUH-12CDti2-a	Campylobacter concisus
GCA_002913685.1	PPCB00000000	SAMN08200388	AAUH-5CDo	Campylobacter concisus
GCA_002913665.1	PPCA00000000	SAMN08200389	AAUH-15UCdp-a	Campylobacter concisus
GCA_002913635.1	PPBY00000000	SAMN08200391	AAUH-43UCce-a	Campylobacter concisus
GCA_002913625.1	PPBU00000000	SAMN08200395	AAUH-25Df3	Campylobacter concisus
GCA_002913605.1	PPBW00000000	SAMN08200393	AAUH-15UCdp	Campylobacter concisus
GCA_002913575.1	PPBT00000000	SAMN08200396	AAUH-8UCpp	Campylobacter concisus
GCA_002913565.1	PPBS00000000	SAMN08200397	AAUH-39CDrec-a	Campylobacter concisus
GCA_002913545.1	PPBR00000000	SAMN08200398	AAUH-9UCpp	Campylobacter concisus
GCA_002913505.1	PPBP00000000	SAMN08200400	AAUH-16UCdp3	Campylobacter concisus
GCA_002913525.1	PPBQ00000000	SAMN08200399	AAUH-11UCsig-a	Campylobacter concisus
GCA_002913485.1	PPBM00000000	SAMN08200403	AAUH-4UCti	Campylobacter concisus
GCA_002913465.1	PPBO00000000	SAMN08200401	AAUH-8UCo	Campylobacter concisus
GCA_002913445.1	PPBK00000000	SAMN08200405	AAUH-35UCdp	Campylobacter concisus
GCA_002913425.1	PPBJ00000000	SAMN08200406	AAUH-12CDtra-a	Campylobacter concisus
GCA_002913385.1	PPBH00000000	SAMN08200408	AAUH-43UCf	Campylobacter concisus
GCA_002913395.1	PPBI00000000	SAMN08200407	AAUH-35UCf	Campylobacter concisus
GCA_002913365.1	PPBF00000000	SAMN08200410	AAUH-3UCce	Campylobacter concisus
GCA_002913345.1	PPBD00000000	SAMN08200412	AAUH-35UCil-a	Campylobacter concisus
GCA_002913325.1	PPBB00000000	SAMN08200414	AAUH-35UCpp	Campylobacter concisus
GCA_002913305.1	PPBA00000000	SAMN08200415	AAUH-3UCce2	Campylobacter concisus
GCA_002913275.1	PPAZ00000000	SAMN08200416	AAUH-16UCdp	Campylobacter concisus
GCA_002913265.1	PPAX00000000	SAMN08200418	AAUH-35UCil3-a	Campylobacter concisus
GCA_002913245.1	PPAY00000000	SAMN08200417	AAUH-35UCil2-a	Campylobacter concisus
GCA_002913225.1	PPAW00000000	SAMN08200419	AAUH-12CDrec-a	Campylobacter concisus
GCA_002913195.1	PPAT00000000	SAMN08200422	AAUH-15UCpp	Campylobacter concisus
GCA_002913185.1	PPAS00000000	SAMN08200423	AAUH-37UCo-a	Campylobacter concisus
GCA_002913155.1	PPAV00000000	SAMN08200420	AAUH-11UCdes-a	Campylobacter concisus
GCA_002913145.1	PPAQ00000000	SAMN08200425	AAUH-12CDsig	Campylobacter concisus
GCA_002913095.1	PPAP00000000	SAMN08200426	AAUH-16UCo-a	Campylobacter concisus
GCA_002913085.1	PPAK00000000	SAMN08200431	AAUH-12CDdes2	Campylobacter concisus
GCA_002913075.1	PPAO00000000	SAMN08200427	AAUH-8UCpp-a	Campylobacter concisus
GCA_002913065.1	PPAH00000000	SAMN08200434	AAUH-12CDti5-a	Campylobacter concisus
GCA_002913045.1	PPAF00000000	SAMN08200436	AAUH-20UCo	Campylobacter concisus
GCA_002913015.1	PPAD00000000	SAMN08200438	AAUH-12CDo	Campylobacter concisus
GCA_002912995.1	PPAE00000000	SAMN08200437	AAUH-12CDti4-a	Campylobacter concisus
GCA_002912985.1	PPAC00000000	SAMN08200439	AAUH-6HCo-a	Campylobacter concisus
GCA_002912965.1	PPAB00000000	SAMN08200440	AAUH-8HCo	Campylobacter concisus
GCA_002912925.1	POZY00000000	SAMN08200443	AAUH-14HCce	Campylobacter concisus
GCA_002912935.1	POZZ00000000	SAMN08200442	AAUH-8HCo-a	Campylobacter concisus
GCA_002912885.1	POZW00000000	SAMN08200445	AAUH-55UCtra-a	Campylobacter concisus
GCA_002912895.1	POZX00000000	SAMN08200444	AAUH-2010376221	Campylobacter concisus
GCA_002912865.1	POZV00000000	SAMN08200446	AAUH-1Dasc	Campylobacter concisus
GCA_002912815.1	POZR00000000	SAMN08200450	AAUH-10HCdes7	Campylobacter concisus
GCA_002912825.1	POZS00000000	SAMN08200449	AAUH-10HCdes2	Campylobacter concisus
GCA_002912805.1	POZT00000000	SAMN08200448	AAUH-10HCdes4	Campylobacter concisus
GCA_002912445.1	PPCJ00000000	SAMN08200476	AAUH-44UCsig-a	Campylobacter sp. AAUH-44UCsig-a

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Campylobacter concisus

Campylobacter concisus strains from inflammatory bowel disease

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