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Genome Information for Medicago truncatula
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time-course salt stress experiment of model legume Medicago truncatula roots using Affymetrix Medicago Array, aimed to dig some useful gene for improve salt resistance for legumes and other crops
Overall design: 4 samples of Medicago truncatula germinated seedlings
grown in Petri dishes for 3 days
180mM NaCl salt stress
material collect at 0, 6, 24, 48 hour after salt stress beginning
3 biological replicates
2 ug of total RNA was used to synthesize doublestranded cDNA
| Accession | PRJNA114603; GEO: GSE13921 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Medicago truncatula[Taxonomy ID: 3880] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago; Medicago truncatula |
| Publications | Li D et al., "An expression database for roots of the model legume Medicago truncatula under salt stress.", BMC Genomics, 2009 Nov 11;10:517 |
| Submission | Registration date: 12-Dec-2008
Tao Wang Lab, College of Biological Sciences, China Agricultural University, State key Laboratory for Agricultural Biotechnology |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| GEO DataSets | 1 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 735336 |
| Data volume, Processed Mbytes | 27 |
| Data volume, Supplementary Mbytes | 57 |