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Accession: PRJEB37539 ID: 626295

Optimizing Rhizobium-legume symbioses by simultaneous measurement of rhizobial competitiveness and N2 fixation in nodules

Identification of rhizobial strains at the single nodule level using plasmid barcodes (Plasmid-ID)

Rhizobial nodulation competitiveness and effectiveness at N2 fixation are independent traits, making their measurement extremely time-consuming with low experimental throughput. More...
AccessionPRJEB37539
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 18-Apr-2020
University of Oxford, Oxford, England, UK
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)728
WGS master19
SRA Experiments13
Other datasets
BioSample32
Assembly19
Assembly details:
Assembly levelNumber of Assemblies
19
19
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_902850275.2ScaffoldCADHRW000000000SAMEA6647150
clinical strain from anonymous patient from Besancon hospital
GCA_902850355.2ScaffoldCADHSA000000000SAMEA6647159
clinical strain from anonymous patient of Limoges Hospital
GCA_902850335.2ScaffoldCAJIXW000000000SAMEA6647155
commensal strain from anonymous patient (individual 1)
GCA_902850325.2ScaffoldCADHSD000000000SAMEA6647158
commensal strain from anonymous patient (individual 7)
GCA_902850345.1ScaffoldCADHSC000000000SAMEA6647157
commensal strain from anonymous patient (individual 4)
GCA_902859045.1ScaffoldCADIHD000000000SAMEA6647165
clinical strain from anonymous patient of Limoges Hospital
GCA_902859035.1ScaffoldCADIHE000000000SAMEA6647169
clinical strain from anonymous patient of Tours Hospital
GCA_902859015.1ScaffoldCADIHH000000000SAMEA6647167
clinical strain from anonymous patient of Nancy Hospital
GCA_902859025.1ScaffoldCADIHF000000000SAMEA6647166
clinical strain from anonymous patient of Limoges Hospital
GCA_902859005.1ScaffoldCADIHG000000000SAMEA6647168
clinical strain from anonymous patient of Nancy Hospital
GCA_902858995.1ScaffoldCADIHA000000000SAMEA6647164
clinical strain from anonymous patient of Limoges Hospital
GCA_902858945.1ScaffoldCADIGX000000000SAMEA6647162
clinical strain from anonymous patient of Limoges Hospital
GCA_902858935.1ScaffoldCADIGW000000000SAMEA6647161
clinical strain from anonymous patient of Limoges Hospital
GCA_902858925.1ScaffoldCADIGV000000000SAMEA6647160
clinical strain from anonymous patient of Limoges Hospital
GCA_902850315.1ScaffoldCADHRX000000000SAMEA6647151
clinical strain from anonymous patient of Besancon hospital
GCA_902850305.1ScaffoldCADHRY000000000SAMEA6647153
clinical strain from anonymous patient at Besancon hospital
GCA_902850285.1ScaffoldCADHRZ000000000SAMEA6647152
clinical strain from anonymous patient at Besancon hospital
GCA_903557885.1ScaffoldCAGXLV000000000SAMEA6647156
commensal strain from anonymous patient (individual 4)
GCA_903172975.1ScaffoldCAETAU000000000SAMEA6647154
commensal strain from anonymous patient (individual 1)
SRA Data Details
ParameterValue
Data volume, Gbases10
Data volume, Mbytes8755

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