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Items: 1 to 20 of 85

1.

Identify dysregulated genes in a zebrafish model for C9 RNA toxicity

HNRNPK alleviates RNA toxicity by counteracting DNA damage in C9orf72 ALS

Project data type: Other
Scope:
Monoisolate
vib-ku leuven
Accession:
PRJEB50765
ID:
872460
2.

Human

CRISPR/Cas9-Mediated Excision of ALS/FTD-Causing Hexanucleotide Repeat Expansion in C9ORF72 rescues major disease mechanisms in vivo and in vitro

Project data type: Raw sequence reads
Scope:
Multispecies
University of Massachusetts Medical School
Accession:
PRJNA871245
ID:
871245
3.

C9ORF72 C9-500 sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
UMASS Medical School
Accession:
PRJNA870226
ID:
870226
4.

Longitudinal and transversal comparison of iPSC-derived ALS_C9orf72 and healthy motor neurons at DIV21 and DIV42

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Ulm University
Accession:
PRJNA831563
ID:
831563
5.

Transcriptome sequencing lncRNA network construction in cardiac fibrosis and heart failure

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Cardiovasology, Shijiazhuang People’s Hospital
Accession:
PRJNA806691
ID:
806691
6.

Transcriptome sequencing and ceRNA (lncRNA-miRNA-mRNA) network construction in cardiac fibrosis and heart failure

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Cardiovasology, Shijiazhuang People’s Hospital
Accession:
PRJNA804873
ID:
804873
7.

poly-PR expression invokes massive changes in cellular transcriptome and leads to upregulation of RQC genes at transcriptional level

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Hatters, Department of Biochemistry and Pharmacology, University of Melbourne
Accession:
PRJNA798624
ID:
798624
8.

Whole genome sequencing reveals that variants in the Interleukin 18 Receptor Accessory Protein 3′UTR protect against ALS

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Weizmann Institute of Science
Accession:
PRJNA775976
ID:
775976
9.

Single cell RNA-sequencing of long-term human control and C9ORF72 ALS/FTD patient-specific iPSC-derived cortical organoid slice cultures

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Lakatos, Clinical Neurosciences, University of Cambridge
Accession:
PRJNA747250
ID:
747250
10.

Ribosome Profiling Reveals Novel Regulation of C9ORF72 GGGGCC Repeat-Containing RNA Translation

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
University of Massachusetts Medical School
Accession:
PRJNA737801
ID:
737801
11.

Single-cell dissection of the primary motor cortex in ALS and FTLD patients.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Heiman, Brain and Cognitive Sciences, Massachusetts Institute of Technology
Accession:
PRJNA729486
ID:
729486
12.

RNA-seq after double-stranded-RNA immunoprecipitation (dsRIP) from a transgenic mouse with a structural genomic lesion

Project data type: Raw sequence reads
Scope:
Multispecies
Massachusetts General Hospital
Accession:
PRJNA717326
ID:
717326
13.

Comparison of the whole transcriptomes between ALS-mutant and Healthy control motor neurons

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Ulm University
Accession:
PRJNA714111
ID:
714111
14.

CaBagE: a Cas9-based Background Elimation Strategy for Targeted, Long-read DNA Sequencing

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Phenotype or Genotype
Scope:
Multiisolate
UNIVERSITY OF UTAH
Accession:
PRJNA706072
ID:
706072
15.

CaBagE: a Cas9-based Background Elimation Strategy for Targeted, Long-read DNA Sequencing

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Umbrella project (Subtype: Authorized Access)
NHGRI
Accession:
PRJNA706071
ID:
706071
16.

Transcriptomic profiling of purified mature olfactory sensory neurons from transgenic mice expressing genomically encoded double-stranded RNA

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Neurology, Massachusetts General Hospital
Accession:
PRJNA700413
ID:
700413
17.

C9orf72 deficiency promotes microglial mediated synaptic loss in aging and amyloid accumulation [scRNA-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Baloh, Regenerative Medicine Institute, Cedars-Sinai Medical Center
Accession:
PRJNA691544
ID:
691544
18.

C9orf72 deficiency promotes microglial mediated synaptic loss in aging and amyloid accumulation [bulk RNA-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Baloh, Regenerative Medicine Institute, Cedars-Sinai Medical Center
Accession:
PRJNA691543
ID:
691543
19.

C9orf72 deficiency promotes microglial mediated synaptic loss in aging and amyloid accumulation

Umbrella project
Baloh, Regenerative Medicine Institute, Cedars-Sinai Medical Center
Accession:
PRJNA691540
ID:
691540
20.

Characterization of C9orf72 haplotypes to evaluate the effects of normal and pathological variations on its expression and splicing

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Reubinoff, Gene Therapy, Hadassah university hospital
Accession:
PRJNA683890
ID:
683890

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