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Accession: PRJEB37285 ID: 657221

ESBL-producing E. coli from Children and Domestic Animals in Ecuador

Environmental Spread of Extended Spectrum Beta-lactamase (ESBL) Producing E. coli and ESBL Genes Among Children and Domestic Animals in Ecuador

Background: There is a significant gap in our understanding of the sources of multidrug-resistant bacteria and resistance genes in community settings where human-animal interfaces exist. More...
AccessionPRJEB37285
Data TypeGenome sequencing and assembly
ScopeMonoisolate
PublicationsSalinas L et al., "Environmental Spread of Extended Spectrum Beta-Lactamase (ESBL) Producing Escherichia coli and ESBL Genes among Children and Domestic Animals in Ecuador.", Environ Health Perspect, 2021 Feb;129(2):27007
SubmissionRegistration date: 14-Aug-2020
Universidad San Francisco de Quito (USFQ)
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)66197
WGS master264
Publications
PubMed1
PMC1
Other datasets
BioSample264
Assembly264
Assembly details:
Assembly levelNumber of Assemblies
264
264
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_902827435.1ContigCADEIH000000000SAMEA6624289
FECES
GCA_902827425.1ContigCADEIJ000000000SAMEA6624279
FECES
GCA_902829085.1ContigCADEOT000000000SAMEA6624410
FECES
GCA_902829055.1ContigCADEOV000000000SAMEA6624443
FECES
GCA_902829075.1ContigCADEOU000000000SAMEA6624378
FECES
GCA_902829065.1ContigCADEOS000000000SAMEA6624377
FECES
GCA_902829045.1ContigCADEOW000000000SAMEA6624444
FECES
GCA_902828995.1ContigCADEON000000000SAMEA6624446
FECES
GCA_902829015.1ContigCADEOQ000000000SAMEA6624318
FECES
GCA_902829005.1ContigCADEOP000000000SAMEA6624319
FECES
GCA_902829025.1ContigCADEOM000000000SAMEA6624424
FECES
GCA_902828985.1ContigCADEOK000000000SAMEA6624301
FECES
GCA_902828945.1ContigCADEOI000000000SAMEA6624448
FECES
GCA_902828955.1ContigCADEOL000000000SAMEA6624323
FECES
GCA_902828975.1ContigCADEOO000000000SAMEA6624320
FECES
GCA_902828965.1ContigCADEOJ000000000SAMEA6624445
FECES
GCA_902829035.1ContigCADEOR000000000SAMEA6624447
FECES
GCA_902828925.1ContigCADENZ000000000SAMEA6624440
FECES
GCA_902828895.1ContigCADENY000000000SAMEA6624439
FECES
GCA_902828875.1ContigCADEOF000000000SAMEA6624434
FECES
GCA_902828915.1ContigCADEOD000000000SAMEA6624437
FECES
GCA_902828935.1ContigCADEOC000000000SAMEA6624436
FECES
GCA_902828905.1ContigCADEOE000000000SAMEA6624441
FECES
GCA_902828855.1ContigCADEOH000000000SAMEA6624433
FECES
GCA_902828885.1ContigCADEOG000000000SAMEA6624435
FECES
GCA_902828865.1ContigCADEOB000000000SAMEA6624438
FECES
GCA_902828845.1ContigCADEOA000000000SAMEA6624442
FECES
GCA_902828835.1ContigCADENH000000000SAMEA6624423
FECES
GCA_902828825.1ContigCADENM000000000SAMEA6624419
FECES
GCA_902828815.1ContigCADENK000000000SAMEA6624422
FECES
GCA_902828785.1ContigCADENR000000000SAMEA6624421
FECES
GCA_902828715.1ContigCADENG000000000SAMEA6624420
FECES
GCA_902828765.1ContigCADENJ000000000SAMEA6624429
FECES
GCA_902828745.1ContigCADENL000000000SAMEA6624428
FECES
GCA_902828755.1ContigCADENP000000000SAMEA6624413
FECES
GCA_902828735.1ContigCADENI000000000SAMEA6624432
FECES
GCA_902828795.1ContigCADENQ000000000SAMEA6624426
FECES
GCA_902828805.1ContigCADENS000000000SAMEA6624412
FECES
GCA_902828775.1ContigCADENV000000000SAMEA6624415
FECES
GCA_902828725.1ContigCADENN000000000SAMEA6624427
FECES
GCA_902828705.1ContigCADENO000000000SAMEA6624416
FECES
GCA_902828655.1ContigCADENT000000000SAMEA6624411
FECES
GCA_902828695.1ContigCADENX000000000SAMEA6624431
FECES
GCA_902828685.1ContigCADENE000000000SAMEA6624417
FECES
GCA_902828665.1ContigCADENU000000000SAMEA6624430
FECES
GCA_902828675.1ContigCADENW000000000SAMEA6624414
FECES
GCA_902828645.1ContigCADENF000000000SAMEA6624425
FECES
GCA_902828605.1ContigCADEMV000000000SAMEA6624399
FECES
GCA_902828615.1ContigCADENB000000000SAMEA6624401
FECES
GCA_902828625.1ContigCADEMZ000000000SAMEA6624404
FECES
GCA_902828635.1ContigCADEMX000000000SAMEA6624408
FECES
GCA_902828535.1ContigCADEMU000000000SAMEA6624402
FECES
GCA_902828585.1ContigCADEMY000000000SAMEA6624400
FECES
GCA_902828555.1ContigCADENC000000000SAMEA6624409
FECES
GCA_902828565.1ContigCADENA000000000SAMEA6624403
FECES
GCA_902828545.1ContigCADEMW000000000SAMEA6624406
FECES
GCA_902828575.1ContigCADEMT000000000SAMEA6624405
FECES
GCA_902828595.1ContigCADEND000000000SAMEA6624407
FECES
GCA_902828525.1ContigCADEMS000000000SAMEA6624390
FECES
GCA_902828505.1ContigCADEMK000000000SAMEA6624388
FECES
GCA_902828515.1ContigCADEMQ000000000SAMEA6624392
FECES
GCA_902828475.1ContigCADEMB000000000SAMEA6624391
FECES
GCA_902828495.1ContigCADEMP000000000SAMEA6624389
FECES
GCA_902828485.1ContigCADEMO000000000SAMEA6624387
FECES
GCA_902828465.1ContigCADEMG000000000SAMEA6624380
FECES
GCA_902828435.1ContigCADELZ000000000SAMEA6624381
FECES
GCA_902828425.1ContigCADEML000000000SAMEA6624384
FECES
GCA_902828455.1ContigCADEMF000000000SAMEA6624393
FECES
GCA_902828445.1ContigCADEMD000000000SAMEA6624397
FECES
GCA_902828355.1ContigCADEMC000000000SAMEA6624395
FECES
GCA_902828345.1ContigCADEMI000000000SAMEA6624385
FECES
GCA_902828385.1ContigCADEMN000000000SAMEA6624394
FECES
GCA_902828405.1ContigCADEME000000000SAMEA6624396
FECES
GCA_902828415.1ContigCADEMM000000000SAMEA6624383
FECES
GCA_902828365.1ContigCADEMR000000000SAMEA6624382
FECES
GCA_902828335.1ContigCADEMH000000000SAMEA6624398
FECES
GCA_902828375.1ContigCADEMJ000000000SAMEA6624379
FECES
GCA_902828395.1ContigCADEMA000000000SAMEA6624386
FECES
GCA_902828265.1ContigCADELS000000000SAMEA6624364
FECES
GCA_902828325.1ContigCADELR000000000SAMEA6624371
FECES
GCA_902828285.1ContigCADELV000000000SAMEA6624365
FECES
GCA_902828295.1ContigCADELN000000000SAMEA6624374
FECES
GCA_902828315.1ContigCADELU000000000SAMEA6624363
FECES
GCA_902828245.1ContigCADELP000000000SAMEA6624375
FECES
GCA_902828255.1ContigCADELL000000000SAMEA6624376
FECES
GCA_902828305.1ContigCADELQ000000000SAMEA6624370
FECES
GCA_902828275.1ContigCADELW000000000SAMEA6624366
FECES
GCA_902828195.1ContigCADELX000000000SAMEA6624367
FECES
GCA_902828205.1ContigCADELT000000000SAMEA6624368
FECES
GCA_902828235.1ContigCADELY000000000SAMEA6624372
FECES
GCA_902828225.1ContigCADELO000000000SAMEA6624369
FECES
GCA_902828215.1ContigCADELM000000000SAMEA6624373
FECES
GCA_902828075.1ContigCADEKX000000000SAMEA6624356
FECES
GCA_902828005.1ContigCADEKT000000000SAMEA6624354
FECES
GCA_902828175.1ContigCADEKR000000000SAMEA6624357
FECES
GCA_902828165.1ContigCADEKV000000000SAMEA6624343
FECES
GCA_902828095.1ContigCADEKW000000000SAMEA6624350
FECES
GCA_902828045.1ContigCADELA000000000SAMEA6624344
FECES
GCA_902828125.1ContigCADEKY000000000SAMEA6624346
FECES
GCA_902828105.1ContigCADELB000000000SAMEA6624362
FECES
GCA_902828025.1ContigCADEKS000000000SAMEA6624358
FECES
GCA_902828115.1ContigCADELF000000000SAMEA6624359
FECES
GCA_902828055.1ContigCADELE000000000SAMEA6624360
FECES
GCA_902828015.1ContigCADELG000000000SAMEA6624347
FECES
GCA_902828135.1ContigCADELJ000000000SAMEA6624355
FECES
GCA_902828065.1ContigCADELI000000000SAMEA6624352
FECES
GCA_902828035.1ContigCADEKZ000000000SAMEA6624353
FECES
GCA_902828085.1ContigCADELC000000000SAMEA6624351
FECES
GCA_902828185.1ContigCADEKU000000000SAMEA6624361
FECES
GCA_902828155.1ContigCADELH000000000SAMEA6624348
FECES
GCA_902828145.1ContigCADELD000000000SAMEA6624349
FECES
GCA_902827995.1ContigCADELK000000000SAMEA6624345
FECES
GCA_902827965.1ContigCADEKG000000000SAMEA6624331
FECES
GCA_902827985.1ContigCADEKE000000000SAMEA6624335
FECES
GCA_902827975.1ContigCADEKB000000000SAMEA6624333
FECES
GCA_902827945.1ContigCADEKL000000000SAMEA6624326
FECES
GCA_902827955.1ContigCADEKK000000000SAMEA6624336
FECES
GCA_902827875.1ContigCADEKF000000000SAMEA6624327
FECES
GCA_902827915.1ContigCADEKQ000000000SAMEA6624332
FECES
GCA_902827855.1ContigCADEKM000000000SAMEA6624334
FECES
GCA_902827885.1ContigCADEKI000000000SAMEA6624329
FECES
GCA_902827925.1ContigCADEKD000000000SAMEA6624340
FECES
GCA_902827895.1ContigCADEKP000000000SAMEA6624330
FECES
GCA_902827865.1ContigCADEKN000000000SAMEA6624338
FECES
GCA_902827905.1ContigCADEKO000000000SAMEA6624328
FECES
GCA_902827935.1ContigCADEKH000000000SAMEA6624341
FECES
GCA_902827845.1ContigCADEKA000000000SAMEA6624342
FECES
GCA_902827825.1ContigCADEKJ000000000SAMEA6624337
FECES
GCA_902827835.1ContigCADEKC000000000SAMEA6624339
FECES
GCA_902827795.1ContigCADEJX000000000SAMEA6624313
FECES
GCA_902827755.1ContigCADEJV000000000SAMEA6624321
FECES
GCA_902827805.1ContigCADEJT000000000SAMEA6624317
FECES
GCA_902827815.1ContigCADEJR000000000SAMEA6624268
FECES
GCA_902827745.1ContigCADEJU000000000SAMEA6624311
FECES
GCA_902827725.1ContigCADEJZ000000000SAMEA6624308
FECES
GCA_902827735.1ContigCADEJP000000000SAMEA6624325
FECES
GCA_902827705.1ContigCADEJI000000000SAMEA6624269
FECES
GCA_902827685.1ContigCADEJH000000000SAMEA6624306
FECES
GCA_902827665.1ContigCADEJJ000000000SAMEA6624310
FECES
GCA_902827625.1ContigCADEJN000000000SAMEA6624324
FECES
GCA_902827635.1ContigCADEJM000000000SAMEA6624305
FECES
GCA_902827785.1ContigCADEJQ000000000SAMEA6624315
FECES
GCA_902827775.1ContigCADEJS000000000SAMEA6624304
FECES
GCA_902827675.1ContigCADEJG000000000SAMEA6624312
FECES
GCA_902827695.1ContigCADEJK000000000SAMEA6624314
FECES
GCA_902827715.1ContigCADEJY000000000SAMEA6624316
FECES
GCA_902827655.1ContigCADEJO000000000SAMEA6624309
FECES
GCA_902827765.1ContigCADEJW000000000SAMEA6624307
FECES
GCA_902827645.1ContigCADEJL000000000SAMEA6624322
FECES
GCA_902827585.1ContigCADEIY000000000SAMEA6624296
FECES
GCA_902827615.1ContigCADEIT000000000SAMEA6624300
FECES
GCA_902827575.1ContigCADEIW000000000SAMEA6624297
FECES
GCA_902827535.1ContigCADEJA000000000SAMEA6624298
FECES
GCA_902827545.1ContigCADEJC000000000SAMEA6624293
FECES
GCA_902827595.1ContigCADEJD000000000SAMEA6624299
FECES
GCA_902827565.1ContigCADEJE000000000SAMEA6624290
FECES
GCA_902827605.1ContigCADEIU000000000SAMEA6624291
FECES
GCA_902827525.1ContigCADEIV000000000SAMEA6624292
FECES
GCA_902827555.1ContigCADEJB000000000SAMEA6624294
FECES
GCA_902827515.1ContigCADEJF000000000SAMEA6624295
FECES
GCA_902827495.1ContigCADEIX000000000SAMEA6624302
FECES
GCA_902827505.1ContigCADEIZ000000000SAMEA6624303
FECES
GCA_902827475.1ContigCADEIE000000000SAMEA6624278
FECES
GCA_902827455.1ContigCADEII000000000SAMEA6624281
FECES
GCA_902827445.1ContigCADEIK000000000SAMEA6624282
FECES
GCA_902827465.1ContigCADEIP000000000SAMEA6624277
FECES
GCA_902827485.1ContigCADEIA000000000SAMEA6624287
FECES
GCA_902827375.1ContigCADEIM000000000SAMEA6624276
FECES
GCA_902827415.1ContigCADEIL000000000SAMEA6624288
FECES
GCA_902827365.1ContigCADEIS000000000SAMEA6624272
FECES
GCA_902827345.1ContigCADEIQ000000000SAMEA6624285
FECES
GCA_902827355.1ContigCADEIN000000000SAMEA6624274
FECES
GCA_902827405.1ContigCADEIR000000000SAMEA6624284
FECES
GCA_902827395.1ContigCADEID000000000SAMEA6624275
FECES
GCA_902827385.1ContigCADEHZ000000000SAMEA6624280
FECES
GCA_902827335.1ContigCADEIC000000000SAMEA6624273
FECES
GCA_902827305.1ContigCADEIB000000000SAMEA6624283
FECES
GCA_902827295.1ContigCADEIF000000000SAMEA6624286
FECES
GCA_902827315.1ContigCADEIG000000000SAMEA6624270
FECES
GCA_902827325.1ContigCADEIO000000000SAMEA6624271
FECES
GCA_902827285.1ContigCADEHY000000000SAMEA6624223
FECES
GCA_902827275.1ContigCADEHT000000000SAMEA6624267
FECES
GCA_902827265.1ContigCADEHX000000000SAMEA6624263
FECES
GCA_902827235.1ContigCADEHU000000000SAMEA6624266
FECES
GCA_902827245.1ContigCADEHV000000000SAMEA6624265
FECES
GCA_902827255.1ContigCADEHW000000000SAMEA6624264
FECES
GCA_902827065.1ContigCADEHG000000000SAMEA6624241
FECES
GCA_902827045.1ContigCADEHB000000000SAMEA6624209
FECES
GCA_902827035.1ContigCADEHC000000000SAMEA6624211
FECES
GCA_902827025.1ContigCADEHA000000000SAMEA6624210
FECES
GCA_902826995.1ContigCADEGU000000000SAMEA6624261
FECES
GCA_902826975.1ContigCADEGX000000000SAMEA6624262
FECES
GCA_902826985.1ContigCADEGW000000000SAMEA6624260
FECES
GCA_902826965.1ContigCADEGV000000000SAMEA6624259
FECES
GCA_902826955.1ContigCADEGT000000000SAMEA6624258
FECES
GCA_902826925.1ContigCADEHF000000000SAMEA6624257
FECES
GCA_902826895.1ContigCADEGO000000000SAMEA6624256
FECES
GCA_902826875.1ContigCADEGM000000000SAMEA6624255
FECES
GCA_902826845.1ContigCADEGJ000000000SAMEA6624254
FECES
GCA_902826785.1ContigCADEGE000000000SAMEA6624252
FECES
GCA_902826805.1ContigCADEGG000000000SAMEA6624253
FECES
GCA_902826765.1ContigCADEGC000000000SAMEA6624251
FECES
GCA_902826735.1ContigCADEFZ000000000SAMEA6624250
FECES
GCA_902826725.1ContigCADEFW000000000SAMEA6624249
FECES
GCA_902826665.1ContigCADEFS000000000SAMEA6624248
FECES
GCA_902826645.1ContigCADEFP000000000SAMEA6624247
FECES
GCA_902826625.1ContigCADEFO000000000SAMEA6624246
FECES
GCA_902826585.1ContigCADEFL000000000SAMEA6624245
FECES
GCA_902826545.1ContigCADEFH000000000SAMEA6624242
FECES
GCA_902826535.1ContigCADEFE000000000SAMEA6624243
FECES
GCA_902826525.1ContigCADEFB000000000SAMEA6624244
FECES
GCA_902826475.1ContigCADEEY000000000SAMEA6624240
FECES
GCA_902826445.1ContigCADEEW000000000SAMEA6624239
FECES
GCA_902826435.1ContigCADEEQ000000000SAMEA6624238
FECES
GCA_902826405.1ContigCADEEP000000000SAMEA6624237
FECES
GCA_902826375.1ContigCADEFC000000000SAMEA6624236
FECES
GCA_902826355.1ContigCADEEM000000000SAMEA6624235
FECES
GCA_902826285.1ContigCADEEG000000000SAMEA6624234
FECES
GCA_902826275.1ContigCADEEF000000000SAMEA6624233
FECES
GCA_902826235.1ContigCADEEB000000000SAMEA6624232
FECES
GCA_902826205.1ContigCADEDZ000000000SAMEA6624231
FECES
GCA_902826185.1ContigCADEDW000000000SAMEA6624230
FECES
GCA_902826175.1ContigCADEDS000000000SAMEA6624229
FECES
GCA_902826125.1ContigCADEDQ000000000SAMEA6624228
FECES
GCA_902826105.1ContigCADEDP000000000SAMEA6624227
FECES
GCA_902826085.1ContigCADEDK000000000SAMEA6624226
FECES
GCA_902826045.1ContigCADEDF000000000SAMEA6624224
FECES
GCA_902826015.1ContigCADEDI000000000SAMEA6624225
FECES
GCA_902826005.1ContigCADEDD000000000SAMEA6624222
FECES
GCA_902825975.1ContigCADEDB000000000SAMEA6624221
FECES
GCA_902825935.1ContigCADECV000000000SAMEA6624219
FECES
GCA_902825895.1ContigCADECK000000000SAMEA6624212
FECES
GCA_902825915.1ContigCADECL000000000SAMEA6624215
FECES
GCA_902825885.1ContigCADECU000000000SAMEA6624220
FECES
GCA_902825925.1ContigCADECI000000000SAMEA6624217
FECES
GCA_902825755.1ContigCADECT000000000SAMEA6624214
FECES
GCA_902825835.1ContigCADECS000000000SAMEA6624216
FECES
GCA_902825805.1ContigCADECH000000000SAMEA6624213
FECES
GCA_902825765.1ContigCADECR000000000SAMEA6624218
FECES
GCA_902825745.1ContigCADECE000000000SAMEA6624208
FECES
GCA_902825725.1ContigCADECC000000000SAMEA6624207
FECES
GCA_902825735.1ContigCADECD000000000SAMEA6624206
FECES
GCA_902825645.1ContigCADEBS000000000SAMEA6624190
FECES
GCA_902825655.1ContigCADEBM000000000SAMEA6624195
FECES
GCA_902825675.1ContigCADEBO000000000SAMEA6624202
FECES
GCA_902825635.1ContigCADEBW000000000SAMEA6624204
FECES
GCA_902825695.1ContigCADEBX000000000SAMEA6624203
FECES
GCA_902825705.1ContigCADEBZ000000000SAMEA6624196
FECES
GCA_902825665.1ContigCADEBN000000000SAMEA6624201
FECES
GCA_902825715.1ContigCADECB000000000SAMEA6624193
FECES
GCA_902825685.1ContigCADEBT000000000SAMEA6624192
FECES
GCA_902825605.1ContigCADEBL000000000SAMEA6624197
FECES
GCA_902825615.1ContigCADECA000000000SAMEA6624200
FECES
GCA_902825625.1ContigCADEBP000000000SAMEA6624205
FECES
GCA_902825555.1ContigCADEBK000000000SAMEA6624187
FECES
GCA_902825585.1ContigCADEBR000000000SAMEA6624194
FECES
GCA_902825595.1ContigCADEBU000000000SAMEA6624199
FECES
GCA_902825575.1ContigCADEBV000000000SAMEA6624189
FECES
GCA_902825565.1ContigCADEBY000000000SAMEA6624198
FECES
GCA_902825545.1ContigCADEBQ000000000SAMEA6624191
FECES
GCA_902825495.1ContigCADEBH000000000SAMEA6624188
FECES
GCA_902825485.1ContigCADEBI000000000SAMEA6624186
FECES
GCA_902825505.1ContigCADEBJ000000000SAMEA6624185
FECES
GCA_902825535.1ContigCADEBG000000000SAMEA6624184
FECES

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